Strain Fitness in Sinorhizobium meliloti 1021 around SMc00620
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,293,538 | - | SMc00619 | 0.79 | -1.6 | |
1,293,538 | - | SMc00619 | 0.79 | -2.4 | |
1,294,110 | + | +0.4 | |||
1,294,163 | + | SMc00620 | 0.12 | +0.4 | |
1,294,163 | + | SMc00620 | 0.12 | +0.4 | |
1,294,164 | - | SMc00620 | 0.12 | -0.3 | |
1,294,454 | + | SMc00620 | 0.34 | +3.6 | |
1,294,455 | - | SMc00620 | 0.34 | +0.5 | |
1,294,455 | - | SMc00620 | 0.34 | -0.5 | |
1,294,581 | - | SMc00620 | 0.43 | -0.5 | |
1,294,581 | - | SMc00620 | 0.43 | +0.3 | |
1,294,776 | - | SMc00620 | 0.57 | +0.9 | |
1,294,857 | - | SMc00620 | 0.63 | +0.4 | |
1,295,356 | - | +0.6 | |||
1,295,427 | + | -1.1 | |||
1,295,697 | + | SMc00621 | 0.25 | -0.7 | |
1,295,910 | + | SMc00621 | 0.44 | -0.6 | |
1,295,910 | + | SMc00621 | 0.44 | +1.3 | |
1,295,910 | + | SMc00621 | 0.44 | -0.3 | |
1,295,910 | + | SMc00621 | 0.44 | -0.8 | |
1,295,931 | + | SMc00621 | 0.46 | -0.4 | |
1,295,976 | + | SMc00621 | 0.50 | +0.5 | |
1,295,976 | + | SMc00621 | 0.50 | +0.4 | |
1,295,976 | + | SMc00621 | 0.50 | -0.7 | |
1,295,977 | - | SMc00621 | 0.50 | +0.1 | |
1,296,168 | + | SMc00621 | 0.68 | +0.1 | |
1,296,169 | - | SMc00621 | 0.68 | -0.7 | |
1,296,275 | + | SMc00621 | 0.78 | -0.2 | |
1,296,282 | + | SMc00621 | 0.78 | -0.1 |
Or see this region's nucleotide sequence