Strain Fitness in Sinorhizobium meliloti 1021 around SMa5001

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
57,603	+		SMa0110	0.32	-0.8
57,603	+		SMa0110	0.32	-0.3
57,959	+		SMa0110	0.69	-0.8
57,959	+		SMa0110	0.69	+0.2
57,959	+		SMa0110	0.69	+0.5
57,959	+		SMa0110	0.69	-0.5
57,960	-		SMa0110	0.69	-0.0
57,960	-		SMa0110	0.69	-0.1
58,050	-		SMa0110	0.79	+0.6
58,233	-				+0.3
58,440	+		SMa5001	0.45	-1.5
58,472	+		SMa5001	0.55	-1.2
58,473	-		SMa5001	0.56	-0.0
58,534	+		SMa5001	0.75	-0.9
58,534	+		SMa5001	0.75	-2.6
58,534	+		SMa5001	0.75	-0.6
58,535	-		SMa5001	0.75	+1.6
58,536	+		SMa5001	0.76	-0.1
58,537	-		SMa5001	0.76	-0.3
58,537	-		SMa5001	0.76	-0.5
58,537	-		SMa5001	0.76	-0.1
58,537	-		SMa5001	0.76	-0.6
58,566	+		SMa5001	0.85	+2.2
58,567	-		SMa5001	0.85	-0.1
58,602	+				-1.5
58,624	+				-1.2
58,796	-				+0.9
58,839	+				+1.3
58,929	+		SMa0112	0.29	-1.5
58,936	-		SMa0112	0.31	-0.2
59,033	+		SMa0112	0.53	+0.2
59,049	-		SMa0112	0.57	-1.9
59,083	+		SMa0112	0.65	-1.0
59,168	+		SMa0112	0.84	-1.7
59,217	+				-0.6
59,249	+				-2.1
59,249	+				-2.3
59,250	-				-0.1
59,349	+				-1.6
59,349	+				-1.5
59,349	+				-2.0
59,349	+				-0.2
59,350	-				+0.3
59,350	-				-0.1
59,357	+				-1.5
59,373	-				-0.2
59,485	-				-0.2
59,537	+				-2.3
59,609	-				-0.4