Strain Fitness in Sinorhizobium meliloti 1021 around SMa1850

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,048,591	+		SMa1848	0.62	-0.0
1,048,592	-		SMa1848	0.62	+0.2
1,048,786	+		SMa1848	0.75	+0.1
1,048,788	+		SMa1848	0.76	-0.4
1,048,788	+		SMa1848	0.76	+0.9
1,048,788	+		SMa1848	0.76	+0.2
1,048,936	+		SMa1848	0.86	-0.9
1,048,936	+		SMa1848	0.86	-1.9
1,048,943	-		SMa1848	0.86	-1.3
1,049,101	+				+0.1
1,049,102	-				-0.1
1,049,141	-				-0.1
1,049,181	-				-0.4
1,049,204	-				+0.4
1,049,339	+				-0.7
1,049,393	-				+0.3
1,049,393	-				-0.8
1,049,408	-				-0.9
1,049,431	+				-1.0
1,049,431	+				+0.1
1,049,432	-				-1.4
1,049,434	+				-0.7
1,049,434	+				-1.3
1,049,435	-				+0.3
1,049,547	+		SMa1850	0.11	-1.0
1,049,603	-		SMa1850	0.15	-0.3
1,049,603	-		SMa1850	0.15	-1.7
1,049,621	-		SMa1850	0.17	-0.8
1,049,828	-		SMa1850	0.33	-1.3
1,049,828	-		SMa1850	0.33	-0.6
1,049,972	+		SMa1850	0.44	-1.5
1,049,972	+				+0.1
1,049,972	+		SMa1850	0.44	-0.2
1,049,973	-		SMa1850	0.44	+0.1
1,049,973	-		SMa1850	0.44	-0.1
1,049,973	-		SMa1850	0.44	-0.2
1,049,975	-		SMa1850	0.45	+0.5
1,049,975	-		SMa1850	0.45	+0.1
1,050,206	+		SMa1850	0.63	+0.1
1,050,222	-		SMa1850	0.64	-1.5
1,050,226	-		SMa1850	0.64	+0.1
1,050,401	-		SMa1850	0.78	+0.0
1,050,401	-		SMa1850	0.78	-0.7
1,050,448	+		SMa1850	0.82	-1.0
1,050,452	+		SMa1850	0.82	-1.8
1,050,453	-		SMa1850	0.82	-0.1
1,050,453	-		SMa1850	0.82	+0.6
1,050,453	-		SMa1850	0.82	-0.4
1,050,668	-				-0.3
1,050,701	+				-0.5
1,050,750	-				-0.3
1,050,755	+				-0.5
1,050,836	+				+1.1
1,050,865	-		SMa1851	0.25	-0.1
1,050,899	+		SMa1851	0.30	-0.5
1,050,899	+		SMa1851	0.30	+0.6
1,050,900	-		SMa1851	0.30	-0.2
1,050,927	-		SMa1851	0.34	+0.1
1,050,950	+		SMa1851	0.37	-0.6
1,051,104	-		SMa1851	0.60	+0.4
1,051,104	-		SMa1851	0.60	-0.2
1,051,104	-		SMa1851	0.60	-0.6
1,051,104	-		SMa1851	0.60	+0.4
1,051,280	+		SMa1851	0.87	-1.2
1,051,281	-		SMa1851	0.87	-1.1
1,051,329	-				-1.6
1,051,346	+				+2.4
1,051,347	-				-0.6
1,051,347	-				-0.0
1,051,408	-				-0.1
1,051,408	-				-0.8
1,051,457	+				-0.2
1,051,458	-				-1.8
1,051,470	+				+0.3
1,051,475	+				-0.1
1,051,527	+				-0.2
1,051,570	-				+0.8
1,051,599	-				+0.1