Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1368 and SMa1370 overlap by 1 nucleotides SMa1370 and SMa1371 overlap by 4 nucleotides SMa1371 and SMa1374 are separated by 2 nucleotides SMa1374 and SMa1373 overlap by 1 nucleotides
SMa1368: SMa1368 - hypothetical protein, at 751,947 to 752,672
SMa1368
SMa1370: SMa1370 - ABC transporter ATP-binding protein, at 752,672 to 753,655
SMa1370
SMa1371: SMa1371 - ABC transporter ATP-binding protein, at 753,652 to 754,632
SMa1371
SMa1374: SMa1374 - ABC transporter permease, at 754,635 to 755,594
SMa1374
SMa1373: SMa1373 - ABC transporter permease, at 755,594 to 756,514
SMa1373
Position (kb) 753
754
755 Strain fitness (log2 ratio) -1
0
1
2 at 752.896 kb on + strand, within SMa1370 at 752.897 kb on - strand, within SMa1370 at 752.898 kb on + strand, within SMa1370 at 752.899 kb on - strand, within SMa1370 at 752.899 kb on - strand, within SMa1370 at 752.908 kb on + strand, within SMa1370 at 752.908 kb on + strand, within SMa1370 at 752.919 kb on + strand, within SMa1370 at 752.920 kb on - strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 753.024 kb on + strand, within SMa1370 at 753.025 kb on - strand, within SMa1370 at 753.025 kb on - strand, within SMa1370 at 753.030 kb on - strand, within SMa1370 at 753.059 kb on - strand, within SMa1370 at 753.343 kb on + strand, within SMa1370 at 753.345 kb on + strand, within SMa1370 at 753.346 kb on - strand, within SMa1370 at 753.413 kb on - strand, within SMa1370 at 753.609 kb on + strand at 753.610 kb on - strand at 753.656 kb on - strand at 753.820 kb on + strand, within SMa1371 at 753.884 kb on + strand, within SMa1371 at 753.885 kb on - strand, within SMa1371 at 753.947 kb on + strand, within SMa1371 at 753.947 kb on + strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 754.072 kb on + strand, within SMa1371 at 754.073 kb on - strand, within SMa1371 at 754.817 kb on - strand, within SMa1374 at 754.817 kb on - strand, within SMa1374 at 754.887 kb on + strand, within SMa1374 at 755.023 kb on + strand, within SMa1374 at 755.071 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.158 kb on - strand, within SMa1374 at 755.346 kb on - strand, within SMa1374 at 755.434 kb on + strand, within SMa1374 at 755.435 kb on - strand, within SMa1374 at 755.435 kb on - strand, within SMa1374
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 752,896 + SMa1370 0.23 -0.1 752,897 - SMa1370 0.23 -1.2 752,898 + SMa1370 0.23 +0.9 752,899 - SMa1370 0.23 +0.1 752,899 - SMa1370 0.23 +0.6 752,908 + SMa1370 0.24 -0.1 752,908 + SMa1370 0.24 +0.7 752,919 + SMa1370 0.25 -0.2 752,920 - SMa1370 0.25 -0.2 752,961 + SMa1370 0.29 +0.2 752,961 + SMa1370 0.29 +0.3 752,961 + SMa1370 0.29 -1.5 752,961 + SMa1370 0.29 +2.0 752,961 + SMa1370 0.29 -0.9 753,024 + SMa1370 0.36 +0.0 753,025 - SMa1370 0.36 -0.6 753,025 - SMa1370 0.36 -1.2 753,030 - SMa1370 0.36 +0.6 753,059 - SMa1370 0.39 -0.4 753,343 + SMa1370 0.68 +0.4 753,345 + SMa1370 0.68 -0.7 753,346 - SMa1370 0.68 -0.6 753,413 - SMa1370 0.75 +0.5 753,609 + +1.1 753,610 - +0.5 753,656 - -0.5 753,820 + SMa1371 0.17 -0.1 753,884 + SMa1371 0.24 -0.7 753,885 - SMa1371 0.24 -0.2 753,947 + SMa1371 0.30 -1.5 753,947 + SMa1371 0.30 -0.3 753,948 - SMa1371 0.30 -0.5 753,948 - SMa1371 0.30 -0.5 753,948 - SMa1371 0.30 -1.3 753,948 - SMa1371 0.30 -0.1 753,948 - SMa1371 0.30 +0.2 753,948 - SMa1371 0.30 -0.3 754,072 + SMa1371 0.43 +0.0 754,073 - SMa1371 0.43 +0.8 754,817 - SMa1374 0.19 +0.4 754,817 - SMa1374 0.19 +0.3 754,887 + SMa1374 0.26 -0.3 755,023 + SMa1374 0.40 -1.0 755,071 + SMa1374 0.45 -0.4 755,157 + SMa1374 0.54 +0.3 755,157 + SMa1374 0.54 +0.0 755,157 + SMa1374 0.54 -0.8 755,157 + SMa1374 0.54 +0.1 755,157 + SMa1374 0.54 +0.2 755,158 - SMa1374 0.54 +0.1 755,346 - SMa1374 0.74 +0.3 755,434 + SMa1374 0.83 -0.7 755,435 - SMa1374 0.83 -0.3 755,435 - SMa1374 0.83 -0.2
Or see this region's nucleotide sequence