Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1292 and SMa1294 overlap by 4 nucleotides SMa1294 and SMa1296 are separated by 495 nucleotides SMa1296 and SMa1297 are separated by 247 nucleotides
SMa1292: SMa1292 - Peptidase, at 704,981 to 705,916
SMa1292
SMa1294: SMa1294 - hypothetical protein, at 705,913 to 706,359
SMa1294
SMa1296: SMa1296 - alcohol dehydrogenase, at 706,855 to 707,877
SMa1296
SMa1297: SMa1297 - hypothetical protein, at 708,125 to 708,802
SMa1297
Position (kb) 706
707
708 Strain fitness (log2 ratio) -2
-1
0
1 at 706.357 kb on + strand at 706.357 kb on + strand at 706.373 kb on + strand at 706.373 kb on + strand at 706.373 kb on + strand at 706.374 kb on - strand at 706.692 kb on + strand at 706.692 kb on + strand at 706.693 kb on - strand at 706.696 kb on + strand at 706.696 kb on + strand at 706.696 kb on + strand at 706.697 kb on - strand at 706.716 kb on + strand at 706.716 kb on + strand at 706.717 kb on - strand at 706.759 kb on + strand at 706.759 kb on + strand at 706.759 kb on + strand at 706.789 kb on + strand at 706.807 kb on + strand at 706.879 kb on - strand at 707.037 kb on + strand, within SMa1296 at 707.106 kb on + strand, within SMa1296 at 707.106 kb on + strand, within SMa1296 at 707.107 kb on - strand, within SMa1296 at 707.129 kb on + strand, within SMa1296 at 707.284 kb on + strand, within SMa1296 at 707.284 kb on + strand, within SMa1296 at 707.284 kb on + strand at 707.285 kb on - strand, within SMa1296 at 707.324 kb on + strand, within SMa1296 at 707.401 kb on + strand, within SMa1296 at 707.411 kb on + strand, within SMa1296 at 707.411 kb on + strand, within SMa1296 at 707.412 kb on - strand, within SMa1296 at 707.497 kb on + strand, within SMa1296 at 707.497 kb on + strand, within SMa1296 at 707.504 kb on + strand, within SMa1296 at 707.505 kb on - strand, within SMa1296 at 707.505 kb on - strand, within SMa1296 at 707.675 kb on + strand, within SMa1296 at 707.676 kb on - strand, within SMa1296 at 707.777 kb on + strand at 707.778 kb on - strand at 707.778 kb on - strand at 707.963 kb on - strand at 708.145 kb on + strand at 708.215 kb on + strand, within SMa1297 at 708.375 kb on + strand, within SMa1297 at 708.375 kb on + strand, within SMa1297 at 708.376 kb on - strand, within SMa1297 at 708.699 kb on - strand, within SMa1297 at 708.774 kb on - strand at 708.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 706,357 + +0.0 706,357 + -0.2 706,373 + +0.2 706,373 + +0.4 706,373 + -0.6 706,374 - +0.5 706,692 + +0.0 706,692 + +0.2 706,693 - -0.1 706,696 + -1.3 706,696 + -0.7 706,696 + -1.5 706,697 - +0.2 706,716 + -0.4 706,716 + -1.7 706,717 - -1.4 706,759 + +0.1 706,759 + -0.4 706,759 + -0.8 706,789 + -0.9 706,807 + -1.1 706,879 - -0.2 707,037 + SMa1296 0.18 -0.6 707,106 + SMa1296 0.25 -2.2 707,106 + SMa1296 0.25 -1.0 707,107 - SMa1296 0.25 +0.5 707,129 + SMa1296 0.27 -0.0 707,284 + SMa1296 0.42 +0.3 707,284 + SMa1296 0.42 +0.1 707,284 + -0.3 707,285 - SMa1296 0.42 -1.2 707,324 + SMa1296 0.46 +0.4 707,401 + SMa1296 0.53 -0.6 707,411 + SMa1296 0.54 +0.2 707,411 + SMa1296 0.54 -0.9 707,412 - SMa1296 0.54 -0.6 707,497 + SMa1296 0.63 +0.4 707,497 + SMa1296 0.63 -0.3 707,504 + SMa1296 0.63 -0.9 707,505 - SMa1296 0.64 -0.5 707,505 - SMa1296 0.64 +0.2 707,675 + SMa1296 0.80 +1.0 707,676 - SMa1296 0.80 +0.6 707,777 + -0.8 707,778 - -0.5 707,778 - +0.6 707,963 - -1.0 708,145 + +0.3 708,215 + SMa1297 0.13 +0.4 708,375 + SMa1297 0.37 +0.4 708,375 + SMa1297 0.37 -0.8 708,376 - SMa1297 0.37 -1.2 708,699 - SMa1297 0.85 -1.8 708,774 - -1.0 708,774 - -0.5
Or see this region's nucleotide sequence