Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa5006 and SMa0922 are separated by 619 nucleotides
SMa5006: SMa5006 - hypothetical protein, at 510,778 to 511,137
SMa5006
SMa0922: SMa0922 - hypothetical protein, at 511,757 to 512,080
SMa0922
Position (kb) 511
512
513 Strain fitness (log2 ratio) -2
-1
0
1 at 510.912 kb on + strand, within SMa5006 at 510.914 kb on + strand, within SMa5006 at 510.914 kb on + strand, within SMa5006 at 510.914 kb on + strand, within SMa5006 at 510.914 kb on + strand, within SMa5006 at 510.914 kb on + strand, within SMa5006 at 510.914 kb on + strand, within SMa5006 at 510.915 kb on - strand, within SMa5006 at 510.915 kb on - strand, within SMa5006 at 510.964 kb on - strand, within SMa5006 at 510.966 kb on + strand, within SMa5006 at 510.966 kb on + strand, within SMa5006 at 510.967 kb on - strand, within SMa5006 at 510.990 kb on + strand, within SMa5006 at 510.991 kb on - strand, within SMa5006 at 511.007 kb on - strand, within SMa5006 at 511.093 kb on + strand, within SMa5006 at 511.298 kb on + strand at 511.299 kb on - strand at 511.331 kb on + strand at 511.497 kb on + strand at 511.498 kb on - strand at 511.544 kb on + strand at 511.545 kb on - strand at 511.545 kb on - strand at 511.556 kb on - strand at 511.557 kb on + strand at 511.596 kb on + strand at 511.890 kb on - strand, within SMa0922 at 511.967 kb on + strand, within SMa0922 at 511.967 kb on + strand, within SMa0922 at 511.967 kb on + strand, within SMa0922 at 511.968 kb on - strand, within SMa0922 at 512.820 kb on - strand at 512.832 kb on + strand at 512.832 kb on + strand at 512.873 kb on + strand at 512.873 kb on + strand at 512.873 kb on + strand at 512.874 kb on - strand at 512.903 kb on - strand at 512.904 kb on + strand at 512.905 kb on - strand at 512.905 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 510,912 + SMa5006 0.37 +0.1 510,914 + SMa5006 0.38 +0.1 510,914 + SMa5006 0.38 -0.5 510,914 + SMa5006 0.38 -0.8 510,914 + SMa5006 0.38 -0.5 510,914 + SMa5006 0.38 +0.0 510,914 + SMa5006 0.38 +0.5 510,915 - SMa5006 0.38 -2.1 510,915 - SMa5006 0.38 -1.1 510,964 - SMa5006 0.52 -0.3 510,966 + SMa5006 0.52 +0.2 510,966 + SMa5006 0.52 -0.4 510,967 - SMa5006 0.53 +0.6 510,990 + SMa5006 0.59 +1.2 510,991 - SMa5006 0.59 +0.1 511,007 - SMa5006 0.64 +0.6 511,093 + SMa5006 0.88 -1.0 511,298 + -0.4 511,299 - +0.5 511,331 + -0.2 511,497 + +0.0 511,498 - -0.6 511,544 + +0.2 511,545 - -0.2 511,545 - -0.4 511,556 - +0.5 511,557 + +0.1 511,596 + +0.2 511,890 - SMa0922 0.41 +0.3 511,967 + SMa0922 0.65 -0.3 511,967 + SMa0922 0.65 -1.2 511,967 + SMa0922 0.65 -1.4 511,968 - SMa0922 0.65 -0.4 512,820 - +0.2 512,832 + -0.3 512,832 + -1.5 512,873 + -0.6 512,873 + +0.4 512,873 + +0.3 512,874 - +0.7 512,903 - +0.2 512,904 + +0.1 512,905 - -0.3 512,905 - -0.4
Or see this region's nucleotide sequence