Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21650 and SM_b21651 overlap by 18 nucleotides
SM_b21650: SM_b21650 - LacI family transcriptional regulator, at 1,681,406 to 1,682,485
_b21650
SM_b21651: SM_b21651 - plasmid stability protein, at 1,682,468 to 1,682,881
_b21651
Position (kb)
1682
1683 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1681.475 kb on + strand at 1681.476 kb on - strand at 1681.492 kb on + strand at 1681.493 kb on - strand at 1681.493 kb on - strand at 1681.493 kb on - strand at 1681.544 kb on + strand, within SM_b21650 at 1681.545 kb on - strand, within SM_b21650 at 1681.655 kb on + strand, within SM_b21650 at 1681.655 kb on + strand, within SM_b21650 at 1681.655 kb on + strand, within SM_b21650 at 1681.656 kb on - strand, within SM_b21650 at 1681.793 kb on + strand, within SM_b21650 at 1681.851 kb on - strand, within SM_b21650 at 1681.851 kb on - strand, within SM_b21650 at 1681.979 kb on + strand, within SM_b21650 at 1681.980 kb on - strand, within SM_b21650 at 1682.021 kb on + strand, within SM_b21650 at 1682.022 kb on - strand, within SM_b21650 at 1682.022 kb on - strand, within SM_b21650 at 1682.024 kb on - strand, within SM_b21650 at 1682.052 kb on - strand, within SM_b21650 at 1682.100 kb on - strand, within SM_b21650 at 1682.100 kb on - strand, within SM_b21650 at 1682.168 kb on - strand, within SM_b21650 at 1682.168 kb on - strand, within SM_b21650 at 1682.168 kb on - strand, within SM_b21650 at 1682.224 kb on + strand, within SM_b21650 at 1682.559 kb on - strand, within SM_b21651 at 1682.632 kb on - strand, within SM_b21651 at 1682.661 kb on + strand, within SM_b21651 at 1682.661 kb on + strand, within SM_b21651 at 1682.661 kb on + strand, within SM_b21651 at 1682.662 kb on - strand, within SM_b21651 at 1682.662 kb on - strand, within SM_b21651 at 1682.662 kb on - strand, within SM_b21651 at 1682.663 kb on + strand, within SM_b21651 at 1682.663 kb on + strand, within SM_b21651 at 1682.752 kb on - strand, within SM_b21651 at 1682.871 kb on - strand at 1683.011 kb on + strand at 1683.012 kb on - strand at 1683.012 kb on - strand at 1683.013 kb on + strand at 1683.014 kb on - strand at 1683.150 kb on + strand at 1683.152 kb on + strand at 1683.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,681,475 + -1.0 1,681,476 - -0.0 1,681,492 + -1.1 1,681,493 - +0.3 1,681,493 - +1.6 1,681,493 - +2.2 1,681,544 + SM_b21650 0.13 +0.6 1,681,545 - SM_b21650 0.13 -0.5 1,681,655 + SM_b21650 0.23 -0.4 1,681,655 + SM_b21650 0.23 -0.2 1,681,655 + SM_b21650 0.23 -0.6 1,681,656 - SM_b21650 0.23 +0.4 1,681,793 + SM_b21650 0.36 -0.6 1,681,851 - SM_b21650 0.41 -0.0 1,681,851 - SM_b21650 0.41 -0.2 1,681,979 + SM_b21650 0.53 +0.3 1,681,980 - SM_b21650 0.53 -0.0 1,682,021 + SM_b21650 0.57 -0.6 1,682,022 - SM_b21650 0.57 -1.0 1,682,022 - SM_b21650 0.57 +0.2 1,682,024 - SM_b21650 0.57 -0.8 1,682,052 - SM_b21650 0.60 -0.1 1,682,100 - SM_b21650 0.64 +0.1 1,682,100 - SM_b21650 0.64 -1.1 1,682,168 - SM_b21650 0.71 +0.7 1,682,168 - SM_b21650 0.71 +0.7 1,682,168 - SM_b21650 0.71 +0.9 1,682,224 + SM_b21650 0.76 +0.3 1,682,559 - SM_b21651 0.22 +0.4 1,682,632 - SM_b21651 0.40 -0.9 1,682,661 + SM_b21651 0.47 -0.9 1,682,661 + SM_b21651 0.47 +0.6 1,682,661 + SM_b21651 0.47 +0.8 1,682,662 - SM_b21651 0.47 +2.6 1,682,662 - SM_b21651 0.47 +0.4 1,682,662 - SM_b21651 0.47 +1.3 1,682,663 + SM_b21651 0.47 -0.6 1,682,663 + SM_b21651 0.47 +0.0 1,682,752 - SM_b21651 0.69 -0.4 1,682,871 - -0.1 1,683,011 + +1.6 1,683,012 - -2.5 1,683,012 - -1.8 1,683,013 + +0.4 1,683,014 - -2.7 1,683,150 + -0.0 1,683,152 + -0.5 1,683,172 - -2.3
Or see this region's nucleotide sequence