Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21328 and SM_b21329 are separated by 58 nucleotides SM_b21329 and SM_b21330 are separated by 215 nucleotides SM_b21330 and SM_b21331 are separated by 231 nucleotides SM_b21331 and SM_b21332 are separated by 273 nucleotides
SM_b21328: SM_b21328 - Sir2-like transcriptional silencer protein, at 997,274 to 998,092
_b21328
SM_b21329: SM_b21329 - hypothetical protein, at 998,151 to 998,321
_b21329
SM_b21330: SM_b21330 - hypothetical protein, at 998,537 to 998,746
_b21330
SM_b21331: SM_b21331 - hypothetical protein, at 998,978 to 999,298
_b21331
SM_b21332: SM_b21332 - hypothetical protein, at 999,572 to 1,000,069
_b21332
Position (kb) 998
999 Strain fitness (log2 ratio) -2
-1
0
1
2 at 997.644 kb on + strand, within SM_b21328 at 997.645 kb on - strand, within SM_b21328 at 997.710 kb on + strand, within SM_b21328 at 997.710 kb on + strand, within SM_b21328 at 997.732 kb on - strand, within SM_b21328 at 997.732 kb on - strand, within SM_b21328 at 997.755 kb on + strand, within SM_b21328 at 997.755 kb on + strand, within SM_b21328 at 997.756 kb on - strand, within SM_b21328 at 997.767 kb on + strand, within SM_b21328 at 997.768 kb on - strand, within SM_b21328 at 997.917 kb on + strand, within SM_b21328 at 998.132 kb on - strand at 998.152 kb on + strand at 998.153 kb on - strand at 998.303 kb on + strand, within SM_b21329 at 998.303 kb on + strand, within SM_b21329 at 998.304 kb on - strand, within SM_b21329 at 998.314 kb on + strand at 998.314 kb on + strand at 998.422 kb on + strand at 998.532 kb on + strand at 998.533 kb on - strand at 998.697 kb on + strand, within SM_b21330 at 998.698 kb on - strand, within SM_b21330 at 998.720 kb on + strand, within SM_b21330 at 998.836 kb on + strand at 998.837 kb on - strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.888 kb on - strand at 998.888 kb on - strand at 998.888 kb on - strand at 999.011 kb on - strand, within SM_b21331 at 999.011 kb on - strand, within SM_b21331 at 999.248 kb on + strand, within SM_b21331 at 999.248 kb on + strand, within SM_b21331 at 999.249 kb on - strand, within SM_b21331 at 999.250 kb on + strand, within SM_b21331 at 999.344 kb on - strand at 999.344 kb on - strand at 999.500 kb on + strand at 999.501 kb on - strand at 999.627 kb on - strand, within SM_b21332 at 999.627 kb on - strand, within SM_b21332 at 999.680 kb on - strand, within SM_b21332 at 999.707 kb on + strand, within SM_b21332 at 999.708 kb on - strand, within SM_b21332 at 999.708 kb on - strand, within SM_b21332 at 999.708 kb on - strand, within SM_b21332
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 997,644 + SM_b21328 0.45 -0.4 997,645 - SM_b21328 0.45 -2.3 997,710 + SM_b21328 0.53 -0.2 997,710 + SM_b21328 0.53 -0.2 997,732 - SM_b21328 0.56 -0.4 997,732 - SM_b21328 0.56 -1.0 997,755 + SM_b21328 0.59 +0.1 997,755 + SM_b21328 0.59 +0.4 997,756 - SM_b21328 0.59 -0.2 997,767 + SM_b21328 0.60 -0.5 997,768 - SM_b21328 0.60 +0.0 997,917 + SM_b21328 0.79 -1.0 998,132 - -0.6 998,152 + -0.5 998,153 - +0.1 998,303 + SM_b21329 0.89 +0.4 998,303 + SM_b21329 0.89 -0.5 998,304 - SM_b21329 0.89 -0.9 998,314 + +1.2 998,314 + +0.0 998,422 + -0.2 998,532 + +0.6 998,533 - -2.0 998,697 + SM_b21330 0.76 -1.5 998,698 - SM_b21330 0.77 -0.0 998,720 + SM_b21330 0.87 -0.7 998,836 + +0.7 998,837 - +0.4 998,887 + -0.4 998,887 + -0.9 998,887 + +0.9 998,887 + -0.3 998,888 - -0.5 998,888 - -0.4 998,888 - +2.1 999,011 - SM_b21331 0.10 -0.4 999,011 - SM_b21331 0.10 -0.2 999,248 + SM_b21331 0.84 -0.5 999,248 + SM_b21331 0.84 +0.8 999,249 - SM_b21331 0.84 +0.2 999,250 + SM_b21331 0.85 -0.4 999,344 - -0.2 999,344 - +0.2 999,500 + +0.4 999,501 - -0.0 999,627 - SM_b21332 0.11 +0.6 999,627 - SM_b21332 0.11 -0.7 999,680 - SM_b21332 0.22 +0.7 999,707 + SM_b21332 0.27 -1.2 999,708 - SM_b21332 0.27 -0.8 999,708 - SM_b21332 0.27 -0.1 999,708 - SM_b21332 0.27 +0.6
Or see this region's nucleotide sequence