Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21206

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSM_b21205 and SM_b21206 overlap by 4 nucleotidesSM_b21206 and SM_b21207 overlap by 1 nucleotides SM_b21205: SM_b21205 - ABC transporter permease, at 957,069 to 958,223 _b21205 SM_b21206: SM_b21206 - ABC transporter ATP-binding protein, at 958,220 to 959,968 _b21206 SM_b21207: SM_b21207 - hypothetical protein, at 959,968 to 960,972 _b21207 Position (kb) 958 959 960Strain fitness (log2 ratio) -2 -1 0 1 2at 957.226 kb on + strand, within SM_b21205at 957.226 kb on + strand, within SM_b21205at 957.227 kb on - strand, within SM_b21205at 957.227 kb on - strand, within SM_b21205at 957.227 kb on - strand, within SM_b21205at 957.227 kb on - strand, within SM_b21205at 957.409 kb on + strand, within SM_b21205at 957.410 kb on - strand, within SM_b21205at 957.502 kb on + strand, within SM_b21205at 957.778 kb on + strand, within SM_b21205at 957.779 kb on - strand, within SM_b21205at 958.192 kb on + strandat 958.193 kb on - strandat 958.357 kb on - strandat 958.359 kb on - strandat 958.447 kb on + strand, within SM_b21206at 958.666 kb on - strand, within SM_b21206at 958.666 kb on - strand, within SM_b21206at 958.713 kb on + strand, within SM_b21206at 958.713 kb on + strand, within SM_b21206at 958.714 kb on - strand, within SM_b21206at 958.737 kb on + strand, within SM_b21206at 958.737 kb on + strand, within SM_b21206at 958.737 kb on + strand, within SM_b21206at 958.737 kb on + strand, within SM_b21206at 958.738 kb on - strand, within SM_b21206at 958.738 kb on - strand, within SM_b21206at 958.742 kb on + strand, within SM_b21206at 958.900 kb on + strand, within SM_b21206at 959.047 kb on + strand, within SM_b21206at 959.358 kb on + strand, within SM_b21206at 959.695 kb on + strand, within SM_b21206at 959.695 kb on + strand, within SM_b21206at 959.695 kb on + strand, within SM_b21206at 959.696 kb on - strand, within SM_b21206at 959.696 kb on - strand, within SM_b21206at 959.697 kb on + strand, within SM_b21206at 959.698 kb on - strand, within SM_b21206at 959.756 kb on + strand, within SM_b21206at 959.756 kb on + strand, within SM_b21206at 959.756 kb on + strand, within SM_b21206at 959.757 kb on - strand, within SM_b21206at 959.757 kb on - strand, within SM_b21206at 960.149 kb on + strand, within SM_b21207at 960.149 kb on + strand, within SM_b21207at 960.149 kb on + strand, within SM_b21207at 960.150 kb on - strand, within SM_b21207at 960.150 kb on - strand, within SM_b21207at 960.150 kb on - strand, within SM_b21207at 960.150 kb on - strand, within SM_b21207at 960.153 kb on + strand, within SM_b21207at 960.154 kb on - strand, within SM_b21207at 960.154 kb on - strand, within SM_b21207at 960.231 kb on - strand, within SM_b21207at 960.231 kb on - strand, within SM_b21207at 960.231 kb on - strand, within SM_b21207at 960.270 kb on - strand, within SM_b21207at 960.270 kb on - strand, within SM_b21207at 960.270 kb on - strand, within SM_b21207at 960.276 kb on + strand, within SM_b21207at 960.424 kb on + strand, within SM_b21207at 960.425 kb on - strand, within SM_b21207at 960.543 kb on + strand, within SM_b21207at 960.544 kb on - strand, within SM_b21207at 960.604 kb on + strand, within SM_b21207at 960.605 kb on - strand, within SM_b21207

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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957,226 + SM_b21205 0.14 -0.3
957,226 + SM_b21205 0.14 +0.9
957,227 - SM_b21205 0.14 +0.5
957,227 - SM_b21205 0.14 -0.2
957,227 - SM_b21205 0.14 +0.5
957,227 - SM_b21205 0.14 -0.4
957,409 + SM_b21205 0.29 -0.6
957,410 - SM_b21205 0.30 +0.1
957,502 + SM_b21205 0.37 +0.7
957,778 + SM_b21205 0.61 -1.3
957,779 - SM_b21205 0.61 +0.1
958,192 + -0.3
958,193 - +0.3
958,357 - +0.6
958,359 - -0.2
958,447 + SM_b21206 0.13 +0.4
958,666 - SM_b21206 0.26 +0.1
958,666 - SM_b21206 0.26 +0.1
958,713 + SM_b21206 0.28 +1.2
958,713 + SM_b21206 0.28 +0.1
958,714 - SM_b21206 0.28 +0.6
958,737 + SM_b21206 0.30 -1.1
958,737 + SM_b21206 0.30 -1.0
958,737 + SM_b21206 0.30 -0.4
958,737 + SM_b21206 0.30 +0.5
958,738 - SM_b21206 0.30 +0.4
958,738 - SM_b21206 0.30 +0.4
958,742 + SM_b21206 0.30 +1.0
958,900 + SM_b21206 0.39 -0.6
959,047 + SM_b21206 0.47 +0.8
959,358 + SM_b21206 0.65 -1.2
959,695 + SM_b21206 0.84 -0.5
959,695 + SM_b21206 0.84 +0.9
959,695 + SM_b21206 0.84 +0.3
959,696 - SM_b21206 0.84 +0.6
959,696 - SM_b21206 0.84 -0.3
959,697 + SM_b21206 0.84 +1.9
959,698 - SM_b21206 0.85 -0.0
959,756 + SM_b21206 0.88 +1.4
959,756 + SM_b21206 0.88 +0.4
959,756 + SM_b21206 0.88 +1.0
959,757 - SM_b21206 0.88 -0.2
959,757 - SM_b21206 0.88 +0.9
960,149 + SM_b21207 0.18 -0.6
960,149 + SM_b21207 0.18 +1.9
960,149 + SM_b21207 0.18 -0.1
960,150 - SM_b21207 0.18 -0.3
960,150 - SM_b21207 0.18 +0.0
960,150 - SM_b21207 0.18 -0.4
960,150 - SM_b21207 0.18 -0.6
960,153 + SM_b21207 0.18 +0.0
960,154 - SM_b21207 0.19 +0.4
960,154 - SM_b21207 0.19 -1.1
960,231 - SM_b21207 0.26 +0.2
960,231 - SM_b21207 0.26 +0.1
960,231 - SM_b21207 0.26 +0.4
960,270 - SM_b21207 0.30 +0.7
960,270 - SM_b21207 0.30 -0.4
960,270 - SM_b21207 0.30 -1.2
960,276 + SM_b21207 0.31 +1.9
960,424 + SM_b21207 0.45 -0.5
960,425 - SM_b21207 0.45 -0.4
960,543 + SM_b21207 0.57 -0.4
960,544 - SM_b21207 0.57 +0.8
960,604 + SM_b21207 0.63 -2.6
960,605 - SM_b21207 0.63 -0.1

Or see this region's nucleotide sequence