Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21056 and SM_b21057 overlap by 35 nucleotides SM_b21057 and SM_b21058 are separated by 52 nucleotides SM_b21058 and SM_b21059 are separated by 23 nucleotides SM_b21059 and SM_b21060 are separated by 4 nucleotides
SM_b21056: SM_b21056 - esterase, at 689,474 to 691,801
_b21056
SM_b21057: SM_b21057 - hypothetical protein, at 691,767 to 692,645
_b21057
SM_b21058: SM_b21058 - glucose-1-phosphate cytidylyltransferase, at 692,698 to 692,919
_b21058
SM_b21059: SM_b21059 - glucose-1-phosphate cytidylyltransferase, at 692,943 to 693,467
_b21059
SM_b21060: SM_b21060 - sugar nucleotide epimerase dehydratase, at 693,472 to 694,521
_b21060
Position (kb) 691
692
693 Strain fitness (log2 ratio) -2
-1
0
1 at 690.772 kb on + strand, within SM_b21056 at 690.773 kb on - strand, within SM_b21056 at 690.774 kb on + strand, within SM_b21056 at 690.775 kb on - strand, within SM_b21056 at 690.958 kb on + strand, within SM_b21056 at 691.109 kb on + strand, within SM_b21056 at 691.109 kb on + strand, within SM_b21056 at 691.118 kb on + strand, within SM_b21056 at 691.119 kb on - strand, within SM_b21056 at 691.178 kb on + strand, within SM_b21056 at 691.178 kb on + strand, within SM_b21056 at 691.183 kb on + strand, within SM_b21056 at 691.184 kb on - strand, within SM_b21056 at 691.242 kb on - strand, within SM_b21056 at 691.242 kb on - strand, within SM_b21056 at 691.242 kb on - strand, within SM_b21056 at 691.272 kb on - strand, within SM_b21056 at 691.303 kb on + strand, within SM_b21056 at 691.304 kb on - strand, within SM_b21056 at 691.304 kb on - strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.404 kb on - strand, within SM_b21056 at 691.660 kb on + strand at 691.660 kb on + strand at 691.661 kb on - strand at 691.676 kb on + strand at 691.676 kb on + strand at 691.734 kb on - strand at 691.760 kb on + strand at 691.761 kb on - strand at 692.068 kb on + strand, within SM_b21057 at 692.068 kb on + strand, within SM_b21057 at 692.068 kb on + strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.147 kb on + strand, within SM_b21057 at 692.147 kb on + strand, within SM_b21057 at 692.228 kb on + strand, within SM_b21057 at 692.236 kb on + strand, within SM_b21057 at 692.274 kb on + strand, within SM_b21057 at 692.275 kb on - strand, within SM_b21057 at 692.275 kb on - strand, within SM_b21057 at 692.531 kb on + strand, within SM_b21057 at 692.531 kb on + strand, within SM_b21057 at 692.532 kb on - strand, within SM_b21057 at 692.648 kb on + strand at 692.648 kb on + strand at 692.710 kb on - strand at 692.710 kb on - strand at 692.818 kb on + strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.872 kb on + strand, within SM_b21058 at 692.897 kb on - strand at 692.897 kb on - strand at 693.057 kb on - strand, within SM_b21059 at 693.288 kb on + strand, within SM_b21059 at 693.289 kb on - strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.487 kb on - strand at 693.502 kb on + strand at 693.503 kb on - strand at 693.503 kb on - strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 690,772 + SM_b21056 0.56 +1.4 690,773 - SM_b21056 0.56 -0.1 690,774 + SM_b21056 0.56 -1.2 690,775 - SM_b21056 0.56 +0.5 690,958 + SM_b21056 0.64 -0.1 691,109 + SM_b21056 0.70 +0.1 691,109 + SM_b21056 0.70 +0.0 691,118 + SM_b21056 0.71 +0.2 691,119 - SM_b21056 0.71 -0.1 691,178 + SM_b21056 0.73 -1.3 691,178 + SM_b21056 0.73 -1.6 691,183 + SM_b21056 0.73 -0.5 691,184 - SM_b21056 0.73 +0.0 691,242 - SM_b21056 0.76 +0.2 691,242 - SM_b21056 0.76 +0.0 691,242 - SM_b21056 0.76 +0.6 691,272 - SM_b21056 0.77 +0.0 691,303 + SM_b21056 0.79 -0.2 691,304 - SM_b21056 0.79 -0.1 691,304 - SM_b21056 0.79 -0.7 691,403 + SM_b21056 0.83 -0.3 691,403 + SM_b21056 0.83 -0.3 691,403 + SM_b21056 0.83 +0.5 691,403 + SM_b21056 0.83 -0.3 691,404 - SM_b21056 0.83 +0.2 691,660 + +0.2 691,660 + -0.8 691,661 - -0.3 691,676 + +0.2 691,676 + -0.4 691,734 - +0.3 691,760 + +0.4 691,761 - -0.1 692,068 + SM_b21057 0.34 -0.7 692,068 + SM_b21057 0.34 -1.4 692,068 + SM_b21057 0.34 -0.4 692,069 - SM_b21057 0.34 -0.0 692,069 - SM_b21057 0.34 -0.2 692,069 - SM_b21057 0.34 +0.1 692,069 - SM_b21057 0.34 +0.1 692,147 + SM_b21057 0.43 -0.2 692,147 + SM_b21057 0.43 +0.2 692,228 + SM_b21057 0.52 +0.3 692,236 + SM_b21057 0.53 -0.7 692,274 + SM_b21057 0.58 -0.7 692,275 - SM_b21057 0.58 -0.9 692,275 - SM_b21057 0.58 -0.5 692,531 + SM_b21057 0.87 -0.8 692,531 + SM_b21057 0.87 +0.2 692,532 - SM_b21057 0.87 -0.5 692,648 + -0.6 692,648 + -0.2 692,710 - +0.1 692,710 - -0.3 692,818 + SM_b21058 0.54 +0.2 692,819 - SM_b21058 0.55 -1.2 692,819 - SM_b21058 0.55 -0.5 692,872 + SM_b21058 0.78 +0.8 692,897 - -0.0 692,897 - -1.2 693,057 - SM_b21059 0.22 -0.8 693,288 + SM_b21059 0.66 +1.4 693,289 - SM_b21059 0.66 -0.2 693,395 + SM_b21059 0.86 +0.8 693,395 + SM_b21059 0.86 +0.4 693,396 - SM_b21059 0.86 +0.2 693,396 - SM_b21059 0.86 +0.2 693,396 - SM_b21059 0.86 +0.1 693,487 - -0.2 693,502 + -0.3 693,503 - +0.1 693,503 - +0.4 693,506 + -1.0 693,506 + -0.9 693,506 + +0.1 693,506 + -2.0 693,506 + +0.7 693,506 + +0.5 693,507 - +0.2 693,507 - +0.1 693,507 - -0.5 693,507 - -0.4
Or see this region's nucleotide sequence