Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20249 and SM_b20250 overlap by 4 nucleotides SM_b20250 and SM_b20251 are separated by 71 nucleotides SM_b20251 and SM_b20252 overlap by 88 nucleotides
SM_b20249: SM_b20249 - myo-inositol-1-phosphate synthase, at 255,238 to 256,341
_b20249
SM_b20250: SM_b20250 - hypothetical protein, at 256,338 to 256,937
_b20250
SM_b20251: SM_b20251 - hypothetical protein, at 257,009 to 257,971
_b20251
SM_b20252: SM_b20252 - hypothetical protein, at 257,884 to 259,248
_b20252
Position (kb) 257
258 Strain fitness (log2 ratio) -1
0
1 at 256.067 kb on - strand, within SM_b20249 at 256.067 kb on - strand, within SM_b20249 at 256.068 kb on + strand, within SM_b20249 at 256.234 kb on + strand at 256.238 kb on + strand at 256.417 kb on + strand, within SM_b20250 at 256.494 kb on + strand, within SM_b20250 at 256.494 kb on + strand, within SM_b20250 at 256.494 kb on + strand, within SM_b20250 at 256.664 kb on + strand, within SM_b20250 at 256.664 kb on + strand, within SM_b20250 at 257.004 kb on + strand at 257.004 kb on + strand at 257.005 kb on - strand at 257.099 kb on - strand at 257.198 kb on - strand, within SM_b20251 at 257.525 kb on + strand, within SM_b20251 at 257.526 kb on - strand, within SM_b20251 at 257.526 kb on - strand, within SM_b20251 at 257.608 kb on - strand, within SM_b20251 at 257.667 kb on + strand, within SM_b20251 at 257.678 kb on + strand, within SM_b20251 at 257.678 kb on + strand, within SM_b20251 at 257.984 kb on + strand at 257.985 kb on - strand at 258.018 kb on - strand at 258.527 kb on + strand, within SM_b20252 at 258.749 kb on + strand, within SM_b20252 at 258.806 kb on + strand, within SM_b20252 at 258.858 kb on - strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.896 kb on - strand, within SM_b20252 at 258.896 kb on - strand, within SM_b20252 at 258.896 kb on - strand, within SM_b20252
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 256,067 - SM_b20249 0.75 +0.0 256,067 - SM_b20249 0.75 -0.3 256,068 + SM_b20249 0.75 -0.4 256,234 + -0.5 256,238 + -1.0 256,417 + SM_b20250 0.13 -0.3 256,494 + SM_b20250 0.26 +0.5 256,494 + SM_b20250 0.26 -0.1 256,494 + SM_b20250 0.26 +0.7 256,664 + SM_b20250 0.54 -0.0 256,664 + SM_b20250 0.54 -0.5 257,004 + +0.1 257,004 + +0.6 257,005 - -0.6 257,099 - +1.5 257,198 - SM_b20251 0.20 -0.5 257,525 + SM_b20251 0.54 -0.7 257,526 - SM_b20251 0.54 +0.1 257,526 - SM_b20251 0.54 +1.3 257,608 - SM_b20251 0.62 +1.7 257,667 + SM_b20251 0.68 +0.3 257,678 + SM_b20251 0.69 +0.1 257,678 + SM_b20251 0.69 +0.3 257,984 + +0.5 257,985 - -0.5 258,018 - +0.5 258,527 + SM_b20252 0.47 -1.2 258,749 + SM_b20252 0.63 +0.4 258,806 + SM_b20252 0.68 +0.3 258,858 - SM_b20252 0.71 -0.0 258,895 + SM_b20252 0.74 +0.3 258,895 + SM_b20252 0.74 +0.2 258,895 + SM_b20252 0.74 +0.0 258,895 + SM_b20252 0.74 +0.6 258,895 + SM_b20252 0.74 -0.2 258,895 + SM_b20252 0.74 +0.2 258,895 + SM_b20252 0.74 +0.3 258,895 + SM_b20252 0.74 -0.0 258,895 + SM_b20252 0.74 -1.0 258,896 - SM_b20252 0.74 -0.3 258,896 - SM_b20252 0.74 -1.2 258,896 - SM_b20252 0.74 +1.0
Or see this region's nucleotide sequence