Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20025 and SM_b20026 are separated by 206 nucleotides SM_b20026 and SM_b20027 are separated by 12 nucleotides
SM_b20025: SM_b20025 - hypothetical protein, at 36,147 to 37,124
_b20025
SM_b20026: SM_b20026 - hypothetical protein, at 37,331 to 37,792
_b20026
SM_b20027: SM_b20027 - hypothetical protein, at 37,805 to 39,310
_b20027
Position (kb) 37
38 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 36.405 kb on + strand, within SM_b20025 at 36.406 kb on - strand, within SM_b20025 at 36.492 kb on + strand, within SM_b20025 at 36.493 kb on - strand, within SM_b20025 at 36.693 kb on + strand, within SM_b20025 at 36.694 kb on - strand, within SM_b20025 at 36.694 kb on - strand, within SM_b20025 at 36.804 kb on + strand, within SM_b20025 at 36.906 kb on + strand, within SM_b20025 at 36.907 kb on - strand, within SM_b20025 at 36.907 kb on - strand, within SM_b20025 at 37.113 kb on + strand at 37.742 kb on + strand, within SM_b20026 at 37.742 kb on + strand, within SM_b20026 at 37.791 kb on - strand at 37.791 kb on - strand at 37.791 kb on - strand at 37.884 kb on + strand at 37.885 kb on - strand at 38.006 kb on + strand, within SM_b20027 at 38.006 kb on + strand, within SM_b20027 at 38.006 kb on + strand, within SM_b20027 at 38.006 kb on + strand, within SM_b20027 at 38.007 kb on - strand, within SM_b20027 at 38.007 kb on - strand, within SM_b20027 at 38.010 kb on - strand, within SM_b20027 at 38.010 kb on - strand, within SM_b20027 at 38.053 kb on + strand, within SM_b20027 at 38.053 kb on + strand, within SM_b20027 at 38.053 kb on + strand, within SM_b20027 at 38.054 kb on - strand, within SM_b20027 at 38.244 kb on - strand, within SM_b20027 at 38.360 kb on - strand, within SM_b20027 at 38.360 kb on - strand, within SM_b20027 at 38.363 kb on + strand, within SM_b20027 at 38.363 kb on + strand, within SM_b20027 at 38.364 kb on - strand, within SM_b20027 at 38.403 kb on - strand, within SM_b20027 at 38.598 kb on + strand, within SM_b20027 at 38.599 kb on - strand, within SM_b20027 at 38.640 kb on - strand, within SM_b20027
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 36,405 + SM_b20025 0.26 -0.8 36,406 - SM_b20025 0.26 +3.9 36,492 + SM_b20025 0.35 +1.1 36,493 - SM_b20025 0.35 -1.0 36,693 + SM_b20025 0.56 -0.2 36,694 - SM_b20025 0.56 +0.6 36,694 - SM_b20025 0.56 -0.4 36,804 + SM_b20025 0.67 -0.3 36,906 + SM_b20025 0.78 +0.1 36,907 - SM_b20025 0.78 -1.3 36,907 - SM_b20025 0.78 -0.2 37,113 + -0.5 37,742 + SM_b20026 0.89 +2.1 37,742 + SM_b20026 0.89 +1.0 37,791 - -0.5 37,791 - +0.2 37,791 - +1.1 37,884 + -1.7 37,885 - +0.2 38,006 + SM_b20027 0.13 +0.3 38,006 + SM_b20027 0.13 +0.5 38,006 + SM_b20027 0.13 -1.1 38,006 + SM_b20027 0.13 +0.4 38,007 - SM_b20027 0.13 -0.4 38,007 - SM_b20027 0.13 -0.3 38,010 - SM_b20027 0.14 +1.0 38,010 - SM_b20027 0.14 +0.6 38,053 + SM_b20027 0.16 +1.0 38,053 + SM_b20027 0.16 -0.0 38,053 + SM_b20027 0.16 -0.4 38,054 - SM_b20027 0.17 +0.3 38,244 - SM_b20027 0.29 +1.1 38,360 - SM_b20027 0.37 +0.2 38,360 - SM_b20027 0.37 -0.4 38,363 + SM_b20027 0.37 -0.7 38,363 + SM_b20027 0.37 -1.2 38,364 - SM_b20027 0.37 -0.0 38,403 - SM_b20027 0.40 -0.7 38,598 + SM_b20027 0.53 +1.6 38,599 - SM_b20027 0.53 +0.3 38,640 - SM_b20027 0.55 -0.3
Or see this region's nucleotide sequence