Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09935

Experiment: Pimelic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C)
2,108,256	-		ABZR87_RS09930	0.42	-0.7
2,108,273	+		ABZR87_RS09930	0.43	-0.7
2,108,273	+		ABZR87_RS09930	0.43	+0.3
2,108,483	+		ABZR87_RS09930	0.60	-0.8
2,108,483	+		ABZR87_RS09930	0.60	-1.6
2,108,483	+		ABZR87_RS09930	0.60	+0.5
2,108,484	-		ABZR87_RS09930	0.60	-0.5
2,108,484	-		ABZR87_RS09930	0.60	+0.2
2,108,484	-		ABZR87_RS09930	0.60	+0.2
2,108,484	-		ABZR87_RS09930	0.60	-0.7
2,108,484	-		ABZR87_RS09930	0.60	+0.5
2,108,484	-		ABZR87_RS09930	0.60	-0.1
2,108,504	+		ABZR87_RS09930	0.61	-0.8
2,108,504	+		ABZR87_RS09930	0.61	+1.5
2,108,504	+		ABZR87_RS09930	0.61	+0.2
2,108,505	-		ABZR87_RS09930	0.61	-0.4
2,108,505	-		ABZR87_RS09930	0.61	+0.1
2,108,505	-		ABZR87_RS09930	0.61	-0.4
2,108,505	-		ABZR87_RS09930	0.61	+0.4
2,108,505	-		ABZR87_RS09930	0.61	+0.1
2,108,514	-		ABZR87_RS09930	0.62	-0.4
2,108,514	-		ABZR87_RS09930	0.62	-0.7
2,108,514	-		ABZR87_RS09930	0.62	+0.1
2,108,514	-		ABZR87_RS09930	0.62	-0.0
2,108,579	+		ABZR87_RS09930	0.67	+0.4
2,108,579	+		ABZR87_RS09930	0.67	+0.0
2,108,579	+		ABZR87_RS09930	0.67	+0.1
2,108,580	-		ABZR87_RS09930	0.67	-0.6
2,108,711	+		ABZR87_RS09930	0.78	+0.4
2,108,712	-		ABZR87_RS09930	0.78	-0.2
2,108,825	+		ABZR87_RS09930	0.87	+0.0
2,108,825	+		ABZR87_RS09930	0.87	-0.5
2,108,825	+		ABZR87_RS09930	0.87	-0.8
2,108,826	-		ABZR87_RS09930	0.87	+1.9
2,108,843	+		ABZR87_RS09930	0.88	+0.0
2,108,855	+		ABZR87_RS09930	0.89	-1.1
2,108,856	-		ABZR87_RS09930	0.89	+0.3
2,108,867	+				-0.1
2,108,867	+				+0.1
2,108,868	-				-0.7
2,108,987	+				-0.8
2,108,988	-				-0.3
2,108,988	-				-1.2
2,109,035	+				-1.0
2,109,035	+				+0.4
2,109,036	-				+0.7
2,109,069	+				+0.3
2,109,101	+				+0.2
2,109,101	+				-0.1
2,109,101	+				+1.9
2,109,101	+				-0.2
2,109,101	+				-0.6
2,109,101	+				+0.4
2,109,101	+				-0.2
2,109,101	+				-0.7
2,109,102	-				-0.2
2,109,102	-				-1.0
2,109,102	-				+0.2
2,109,102	-				+0.3
2,109,102	-				-0.3
2,109,102	-				+0.8
2,109,102	-				-0.6
2,109,102	-				+0.5
2,109,102	-				-0.8
2,109,122	+				-0.5
2,109,122	+				+0.3
2,109,122	+				+0.3
2,109,192	-				+0.5
2,109,201	+				-0.7
2,109,247	+				-1.7
2,109,248	-				-1.6
2,109,248	-				-2.3
2,109,288	+				-2.3
2,109,289	-				-1.4
2,109,342	+		ABZR87_RS09935	0.12	-1.1
2,109,885	+		ABZR87_RS09935	0.57	-2.2
2,109,886	-		ABZR87_RS09935	0.57	-2.0
2,109,942	+		ABZR87_RS09935	0.62	-1.9
2,109,942	+		ABZR87_RS09935	0.62	-3.0
2,109,943	-		ABZR87_RS09935	0.62	-1.1
2,109,945	+		ABZR87_RS09935	0.62	-1.0
2,109,945	+		ABZR87_RS09935	0.62	-0.5
2,109,951	+		ABZR87_RS09935	0.63	-2.0
2,109,951	+		ABZR87_RS09935	0.63	-1.7
2,109,951	+		ABZR87_RS09935	0.63	-2.4
2,109,951	+		ABZR87_RS09935	0.63	-1.1
2,109,951	+		ABZR87_RS09935	0.63	-2.5
2,109,951	+		ABZR87_RS09935	0.63	-4.1
2,109,952	-		ABZR87_RS09935	0.63	-1.4
2,109,952	-		ABZR87_RS09935	0.63	-1.0
2,109,952	-		ABZR87_RS09935	0.63	-2.2
2,109,952	-		ABZR87_RS09935	0.63	-2.0
2,109,952	-		ABZR87_RS09935	0.63	-1.0
2,110,198	-		ABZR87_RS09935	0.83	-2.4
2,110,284	+				-2.2
2,110,284	+				-2.0
2,110,284	+				-3.1
2,110,285	-				-1.7
2,110,486	+				-2.6
2,110,486	+				-1.4
2,110,486	+				-2.7
2,110,487	-				+0.2
2,110,487	-				-0.3
2,110,522	+				-0.1
2,110,522	+				-0.5
2,110,531	+				+0.8
2,110,565	+				+0.1
2,110,565	+				+0.2
2,110,565	+				-0.7
2,110,565	+				+0.6
2,110,566	-				-0.9
2,110,566	-				+0.6
2,110,585	+				-0.8
2,110,634	+				-0.8
2,110,635	-				-0.2
2,110,635	-				+0.3
2,110,635	-				-1.0
2,110,639	+				-1.7
2,110,640	-				+0.4
2,110,812	+				-0.7
2,110,813	-				-1.9
2,110,813	-				-0.2
2,110,822	-				-0.4
2,111,010	+		ABZR87_RS09940	0.13	-0.7
2,111,052	+		ABZR87_RS09940	0.15	-1.9
2,111,053	-		ABZR87_RS09940	0.15	+0.2
2,111,064	+		ABZR87_RS09940	0.16	-0.5
2,111,067	+		ABZR87_RS09940	0.16	-0.2
2,111,068	-		ABZR87_RS09940	0.16	-0.7
2,111,069	-		ABZR87_RS09940	0.16	+1.0
2,111,073	+		ABZR87_RS09940	0.16	-0.3
2,111,073	+		ABZR87_RS09940	0.16	-0.1
2,111,073	+		ABZR87_RS09940	0.16	+0.5
2,111,073	+		ABZR87_RS09940	0.16	+0.4
2,111,073	+		ABZR87_RS09940	0.16	-0.1
2,111,074	-		ABZR87_RS09940	0.16	-1.3
2,111,074	-		ABZR87_RS09940	0.16	+0.8
2,111,076	+		ABZR87_RS09940	0.16	-0.9
2,111,076	+		ABZR87_RS09940	0.16	-0.3
2,111,077	-		ABZR87_RS09940	0.16	-0.3
2,111,077	-		ABZR87_RS09940	0.16	+1.6
2,111,077	-		ABZR87_RS09940	0.16	-0.7
2,111,091	+		ABZR87_RS09940	0.17	+0.2
2,111,091	+		ABZR87_RS09940	0.17	-0.6
2,111,091	+		ABZR87_RS09940	0.17	+1.3
2,111,091	+		ABZR87_RS09940	0.17	+1.6
2,111,091	+		ABZR87_RS09940	0.17	-0.8
2,111,092	-		ABZR87_RS09940	0.17	+1.1
2,111,092	-		ABZR87_RS09940	0.17	+0.2
2,111,092	-		ABZR87_RS09940	0.17	+0.0
2,111,092	-		ABZR87_RS09940	0.17	-0.5
2,111,092	-		ABZR87_RS09940	0.17	+0.6
2,111,226	+		ABZR87_RS09940	0.24	+0.8
2,111,226	+		ABZR87_RS09940	0.24	+1.3
2,111,226	+		ABZR87_RS09940	0.24	-0.3
2,111,226	+		ABZR87_RS09940	0.24	+0.8
2,111,226	+		ABZR87_RS09940	0.24	+1.2
2,111,226	+		ABZR87_RS09940	0.24	+1.0
2,111,226	+		ABZR87_RS09940	0.24	+0.4
2,111,226	+		ABZR87_RS09940	0.24	+0.3
2,111,227	-		ABZR87_RS09940	0.24	+0.9
2,111,227	-		ABZR87_RS09940	0.24	+0.2
2,111,227	-		ABZR87_RS09940	0.24	-0.9
2,111,227	-		ABZR87_RS09940	0.24	+0.3
2,111,227	-		ABZR87_RS09940	0.24	+0.6
2,111,250	+		ABZR87_RS09940	0.25	+0.4
2,111,250	+		ABZR87_RS09940	0.25	-0.5
2,111,331	+		ABZR87_RS09940	0.29	+0.3
2,111,331	+		ABZR87_RS09940	0.29	+1.1
2,111,332	-		ABZR87_RS09940	0.29	+1.3
2,111,332	-		ABZR87_RS09940	0.29	-1.1