Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08655

Experiment: Pimelic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C)
1,838,666	+				+0.5
1,838,666	+				-0.3
1,838,666	+				+0.1
1,838,666	+				+0.2
1,838,666	+				-0.8
1,838,666	+				+0.4
1,838,666	+				+0.9
1,838,666	+				-0.1
1,838,667	-				+0.4
1,838,667	-				-1.1
1,838,667	-				+0.6
1,838,667	-				-1.1
1,838,673	+				-2.2
1,838,673	+				+0.2
1,838,673	+				-0.8
1,838,673	+				+0.7
1,838,673	+				-0.2
1,838,674	-				-0.8
1,838,674	-				-1.4
1,838,675	+				-0.2
1,838,675	+				+1.2
1,838,675	+				+1.0
1,838,675	+				-0.0
1,838,783	+		ABZR87_RS08650	0.13	+1.2
1,838,783	+		ABZR87_RS08650	0.13	-0.2
1,838,783	+		ABZR87_RS08650	0.13	-0.5
1,838,868	+		ABZR87_RS08650	0.22	+0.4
1,838,868	+		ABZR87_RS08650	0.22	-0.0
1,838,869	-		ABZR87_RS08650	0.22	-0.5
1,838,869	-		ABZR87_RS08650	0.22	+1.3
1,838,982	+		ABZR87_RS08650	0.34	-0.9
1,838,982	+		ABZR87_RS08650	0.34	-0.5
1,838,994	+		ABZR87_RS08650	0.36	-0.7
1,838,994	+		ABZR87_RS08650	0.36	-0.4
1,838,994	+		ABZR87_RS08650	0.36	-0.1
1,838,994	+		ABZR87_RS08650	0.36	-0.4
1,838,994	+		ABZR87_RS08650	0.36	-0.0
1,838,994	+		ABZR87_RS08650	0.36	+0.6
1,838,994	+		ABZR87_RS08650	0.36	+0.5
1,838,994	+		ABZR87_RS08650	0.36	-0.2
1,838,995	-		ABZR87_RS08650	0.36	+0.5
1,838,995	-		ABZR87_RS08650	0.36	-1.5
1,839,011	+		ABZR87_RS08650	0.37	+0.0
1,839,025	-		ABZR87_RS08650	0.39	+0.1
1,839,025	-		ABZR87_RS08650	0.39	-0.6
1,839,060	+		ABZR87_RS08650	0.43	-0.1
1,839,060	+		ABZR87_RS08650	0.43	-0.0
1,839,060	+		ABZR87_RS08650	0.43	-0.1
1,839,061	-		ABZR87_RS08650	0.43	-1.2
1,839,068	+		ABZR87_RS08650	0.44	+0.1
1,839,068	+		ABZR87_RS08650	0.44	-0.5
1,839,069	-		ABZR87_RS08650	0.44	-0.8
1,839,092	+		ABZR87_RS08650	0.46	-2.7
1,839,092	+		ABZR87_RS08650	0.46	+0.2
1,839,092	+		ABZR87_RS08650	0.46	+0.3
1,839,121	+		ABZR87_RS08650	0.49	-0.2
1,839,121	+		ABZR87_RS08650	0.49	+0.7
1,839,122	-		ABZR87_RS08650	0.50	-0.1
1,839,128	+		ABZR87_RS08650	0.50	+0.3
1,839,225	+		ABZR87_RS08650	0.61	+0.7
1,839,225	+		ABZR87_RS08650	0.61	+0.6
1,839,225	+		ABZR87_RS08650	0.61	+0.3
1,839,225	+		ABZR87_RS08650	0.61	-0.1
1,839,327	+		ABZR87_RS08650	0.72	-0.3
1,839,327	+		ABZR87_RS08650	0.72	-1.3
1,839,327	+		ABZR87_RS08650	0.72	-0.0
1,839,327	+		ABZR87_RS08650	0.72	-0.6
1,839,366	+		ABZR87_RS08650	0.76	+1.5
1,839,366	+		ABZR87_RS08650	0.76	-1.5
1,839,366	+		ABZR87_RS08650	0.76	-0.6
1,839,366	+		ABZR87_RS08650	0.76	+0.2
1,839,366	+		ABZR87_RS08650	0.76	-0.4
1,839,367	-		ABZR87_RS08650	0.76	-2.2
1,839,367	-		ABZR87_RS08650	0.76	-0.0
1,839,367	-		ABZR87_RS08650	0.76	+0.7
1,839,367	-		ABZR87_RS08650	0.76	-1.6
1,839,367	-		ABZR87_RS08650	0.76	-1.8
1,839,367	-		ABZR87_RS08650	0.76	+1.8
1,839,367	-		ABZR87_RS08650	0.76	-0.8
1,839,367	-		ABZR87_RS08650	0.76	+0.2
1,839,367	-		ABZR87_RS08650	0.76	-0.6
1,839,425	+		ABZR87_RS08650	0.83	-0.8
1,839,430	-		ABZR87_RS08650	0.83	-0.0
1,839,524	+				-0.7
1,839,524	+				-0.1
1,839,532	+				-0.6
1,839,532	+				+0.6
1,839,533	-				-1.2
1,839,596	+				-1.7
1,839,596	+				-0.1
1,839,597	-				-1.3
1,839,597	-				-1.1
1,839,597	-				-0.3
1,839,612	-				+0.8
1,839,651	-				+0.0
1,839,702	+		ABZR87_RS08655	0.12	+1.2
1,839,702	+		ABZR87_RS08655	0.12	-1.3
1,839,703	-		ABZR87_RS08655	0.12	+0.6
1,839,703	-		ABZR87_RS08655	0.12	+0.0
1,839,703	-		ABZR87_RS08655	0.12	-0.7
1,839,703	-		ABZR87_RS08655	0.12	-1.5
1,839,703	-		ABZR87_RS08655	0.12	+0.5
1,839,703	-		ABZR87_RS08655	0.12	+0.2
1,839,703	-		ABZR87_RS08655	0.12	-0.3
1,839,706	-		ABZR87_RS08655	0.12	+0.2
1,839,736	+		ABZR87_RS08655	0.16	-1.2
1,839,743	+		ABZR87_RS08655	0.17	-2.2
1,839,744	-		ABZR87_RS08655	0.17	-1.0
1,839,759	-		ABZR87_RS08655	0.19	+0.1
1,839,771	-		ABZR87_RS08655	0.20	-0.7
1,839,816	-		ABZR87_RS08655	0.25	+0.3
1,839,828	+		ABZR87_RS08655	0.26	-0.8
1,839,829	-		ABZR87_RS08655	0.27	+0.3
1,839,829	-		ABZR87_RS08655	0.27	+0.8
1,839,829	-		ABZR87_RS08655	0.27	-2.5
1,839,872	+		ABZR87_RS08655	0.32	-0.7
1,839,926	+		ABZR87_RS08655	0.38	-1.3
1,840,002	+		ABZR87_RS08655	0.46	-1.0
1,840,002	+		ABZR87_RS08655	0.46	-1.1
1,840,068	-		ABZR87_RS08655	0.54	-1.0
1,840,068	-		ABZR87_RS08655	0.54	-1.6
1,840,120	-		ABZR87_RS08655	0.60	-1.5
1,840,380	-		ABZR87_RS08655	0.90	-1.4
1,840,382	+				+0.5
1,840,431	+				-0.4
1,840,504	+				-0.8
1,840,505	-				+0.1
1,840,505	-				-0.1
1,840,561	-		ABZR87_RS08660	0.16	-1.3
1,840,581	-		ABZR87_RS08660	0.20	+0.6
1,840,600	+		ABZR87_RS08660	0.23	+2.5
1,840,622	+		ABZR87_RS08660	0.27	-0.4
1,840,623	-		ABZR87_RS08660	0.27	-0.0
1,840,720	+		ABZR87_RS08660	0.45	+0.3
1,840,721	-		ABZR87_RS08660	0.45	+0.7
1,840,721	-		ABZR87_RS08660	0.45	-0.4
1,840,725	-		ABZR87_RS08660	0.46	-0.1
1,840,725	-		ABZR87_RS08660	0.46	-0.7
1,840,725	-		ABZR87_RS08660	0.46	-0.6
1,840,725	-		ABZR87_RS08660	0.46	-0.7
1,840,777	+		ABZR87_RS08660	0.55	+0.1
1,840,840	+		ABZR87_RS08660	0.67	+1.6
1,840,841	-		ABZR87_RS08660	0.67	-0.6
1,840,841	-		ABZR87_RS08660	0.67	+1.0
1,840,864	-		ABZR87_RS08660	0.71	-1.6
1,840,878	+		ABZR87_RS08660	0.74	+0.2
1,840,879	-		ABZR87_RS08660	0.74	-1.4
1,840,879	-		ABZR87_RS08660	0.74	-0.1
1,840,880	-		ABZR87_RS08660	0.74	-0.6
1,840,881	+		ABZR87_RS08660	0.74	-0.6
1,840,881	+		ABZR87_RS08660	0.74	-0.5
1,840,881	+		ABZR87_RS08660	0.74	+0.1
1,840,881	+		ABZR87_RS08660	0.74	+2.2
1,840,881	+		ABZR87_RS08660	0.74	+0.0
1,840,882	-		ABZR87_RS08660	0.74	-0.5
1,840,882	-		ABZR87_RS08660	0.74	-1.3
1,840,904	+		ABZR87_RS08660	0.79	-0.5
1,840,996	+				-1.0
1,840,997	-				-1.0
1,841,019	+				-0.1
1,841,019	+				-0.3
1,841,020	-				+0.2
1,841,044	+				+0.6
1,841,065	-				+0.2
1,841,065	-				+0.1
1,841,068	+				+0.7
1,841,168	+		ABZR87_RS08665	0.15	+0.4
1,841,168	+		ABZR87_RS08665	0.15	+0.3
1,841,169	-		ABZR87_RS08665	0.15	-0.6
1,841,234	+		ABZR87_RS08665	0.24	-0.2
1,841,234	+		ABZR87_RS08665	0.24	+0.4
1,841,235	-		ABZR87_RS08665	0.24	-0.3
1,841,235	-		ABZR87_RS08665	0.24	+0.9
1,841,255	+		ABZR87_RS08665	0.27	+0.0
1,841,255	+		ABZR87_RS08665	0.27	+0.8
1,841,256	-		ABZR87_RS08665	0.27	-0.4
1,841,256	-		ABZR87_RS08665	0.27	-2.9
1,841,256	-		ABZR87_RS08665	0.27	+0.0
1,841,256	-		ABZR87_RS08665	0.27	+0.1
1,841,265	+		ABZR87_RS08665	0.28	+0.9
1,841,265	+		ABZR87_RS08665	0.28	+0.1
1,841,266	-		ABZR87_RS08665	0.29	-0.9
1,841,266	-		ABZR87_RS08665	0.29	+0.2
1,841,266	-		ABZR87_RS08665	0.29	+0.1
1,841,266	-		ABZR87_RS08665	0.29	+0.1
1,841,266	-		ABZR87_RS08665	0.29	-0.2
1,841,266	-		ABZR87_RS08665	0.29	-0.2
1,841,285	-		ABZR87_RS08665	0.31	-0.7
1,841,285	-		ABZR87_RS08665	0.31	+0.6
1,841,285	-		ABZR87_RS08665	0.31	+0.6
1,841,285	-		ABZR87_RS08665	0.31	+0.4
1,841,292	+		ABZR87_RS08665	0.32	+0.3
1,841,389	-		ABZR87_RS08665	0.45	-0.2
1,841,445	+		ABZR87_RS08665	0.53	+0.4
1,841,446	-		ABZR87_RS08665	0.53	-0.3