Experiment: Pimelic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS07650 and ABZR87_RS07655 are separated by 195 nucleotides ABZR87_RS07655 and ABZR87_RS07660 are separated by 3 nucleotides
ABZR87_RS07650: ABZR87_RS07650 - tRNA dihydrouridine synthase DusB, at 1,620,048 to 1,621,115
_RS07650
ABZR87_RS07655: ABZR87_RS07655 - FAD-dependent oxidoreductase, at 1,621,311 to 1,622,594
_RS07655
ABZR87_RS07660: ABZR87_RS07660 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase, at 1,622,598 to 1,623,833
_RS07660
Position (kb) 1621
1622
1623 Strain fitness (log2 ratio) -1
0
1 at 1620.581 kb on - strand, within ABZR87_RS07650 at 1620.581 kb on - strand, within ABZR87_RS07650 at 1620.581 kb on - strand, within ABZR87_RS07650 at 1620.655 kb on - strand, within ABZR87_RS07650 at 1620.655 kb on - strand, within ABZR87_RS07650 at 1620.862 kb on + strand, within ABZR87_RS07650 at 1620.863 kb on - strand, within ABZR87_RS07650 at 1620.863 kb on - strand, within ABZR87_RS07650 at 1620.863 kb on - strand, within ABZR87_RS07650 at 1621.098 kb on - strand at 1621.248 kb on + strand at 1621.248 kb on + strand at 1621.249 kb on - strand at 1621.266 kb on + strand at 1621.267 kb on - strand at 1621.709 kb on + strand, within ABZR87_RS07655 at 1621.732 kb on + strand, within ABZR87_RS07655 at 1621.749 kb on + strand, within ABZR87_RS07655 at 1621.749 kb on + strand, within ABZR87_RS07655 at 1621.750 kb on - strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.146 kb on + strand, within ABZR87_RS07655 at 1622.147 kb on - strand, within ABZR87_RS07655 at 1622.147 kb on - strand, within ABZR87_RS07655 at 1622.147 kb on - strand, within ABZR87_RS07655 at 1622.147 kb on - strand, within ABZR87_RS07655 at 1622.147 kb on - strand, within ABZR87_RS07655 at 1622.147 kb on - strand, within ABZR87_RS07655 at 1622.179 kb on + strand, within ABZR87_RS07655 at 1622.180 kb on - strand, within ABZR87_RS07655 at 1622.180 kb on - strand, within ABZR87_RS07655 at 1622.180 kb on - strand, within ABZR87_RS07655 at 1622.180 kb on - strand, within ABZR87_RS07655 at 1622.321 kb on - strand, within ABZR87_RS07655
Per-strain Table
Position Strand Gene LocusTag Fraction Pimelic (C) remove 1,620,581 - ABZR87_RS07650 0.50 -0.1 1,620,581 - ABZR87_RS07650 0.50 +0.6 1,620,581 - ABZR87_RS07650 0.50 +0.1 1,620,655 - ABZR87_RS07650 0.57 -1.2 1,620,655 - ABZR87_RS07650 0.57 -0.2 1,620,862 + ABZR87_RS07650 0.76 +1.3 1,620,863 - ABZR87_RS07650 0.76 -0.5 1,620,863 - ABZR87_RS07650 0.76 +0.1 1,620,863 - ABZR87_RS07650 0.76 +0.5 1,621,098 - +1.6 1,621,248 + -0.5 1,621,248 + -0.6 1,621,249 - -0.1 1,621,266 + +0.5 1,621,267 - -0.2 1,621,709 + ABZR87_RS07655 0.31 +0.3 1,621,732 + ABZR87_RS07655 0.33 -0.3 1,621,749 + ABZR87_RS07655 0.34 -0.1 1,621,749 + ABZR87_RS07655 0.34 +0.5 1,621,750 - ABZR87_RS07655 0.34 +0.9 1,622,146 + ABZR87_RS07655 0.65 -0.2 1,622,146 + ABZR87_RS07655 0.65 +0.7 1,622,146 + ABZR87_RS07655 0.65 -1.3 1,622,146 + ABZR87_RS07655 0.65 -0.9 1,622,146 + ABZR87_RS07655 0.65 +0.2 1,622,146 + ABZR87_RS07655 0.65 -0.3 1,622,146 + ABZR87_RS07655 0.65 +0.9 1,622,146 + ABZR87_RS07655 0.65 -0.6 1,622,146 + ABZR87_RS07655 0.65 -1.4 1,622,146 + ABZR87_RS07655 0.65 -0.2 1,622,146 + ABZR87_RS07655 0.65 -0.3 1,622,146 + ABZR87_RS07655 0.65 +0.1 1,622,146 + ABZR87_RS07655 0.65 +0.4 1,622,146 + ABZR87_RS07655 0.65 +0.2 1,622,146 + ABZR87_RS07655 0.65 -0.1 1,622,147 - ABZR87_RS07655 0.65 -0.1 1,622,147 - ABZR87_RS07655 0.65 -0.3 1,622,147 - ABZR87_RS07655 0.65 +0.6 1,622,147 - ABZR87_RS07655 0.65 +0.3 1,622,147 - ABZR87_RS07655 0.65 -0.3 1,622,147 - ABZR87_RS07655 0.65 -1.0 1,622,179 + ABZR87_RS07655 0.68 +0.6 1,622,180 - ABZR87_RS07655 0.68 -0.2 1,622,180 - ABZR87_RS07655 0.68 -0.4 1,622,180 - ABZR87_RS07655 0.68 -0.2 1,622,180 - ABZR87_RS07655 0.68 +0.8 1,622,321 - ABZR87_RS07655 0.79 +0.8
Or see this region's nucleotide sequence