Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06715

Experiment: Pimelic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C)
1,427,338	+				-1.6
1,427,339	-				-0.8
1,427,339	-				-1.5
1,427,339	-				-1.6
1,427,347	+		ABZR87_RS06710	0.10	-0.6
1,427,347	+		ABZR87_RS06710	0.10	-0.8
1,427,347	+		ABZR87_RS06710	0.10	-0.5
1,427,347	+		ABZR87_RS06710	0.10	+0.3
1,427,347	+		ABZR87_RS06710	0.10	-0.4
1,427,347	+		ABZR87_RS06710	0.10	+1.4
1,427,347	+		ABZR87_RS06710	0.10	-0.7
1,427,347	+		ABZR87_RS06710	0.10	-1.6
1,427,347	+		ABZR87_RS06710	0.10	-1.3
1,427,347	+		ABZR87_RS06710	0.10	-0.8
1,427,347	+		ABZR87_RS06710	0.10	-0.4
1,427,347	+		ABZR87_RS06710	0.10	-1.2
1,427,347	+		ABZR87_RS06710	0.10	+0.5
1,427,348	-		ABZR87_RS06710	0.11	-0.1
1,427,348	-		ABZR87_RS06710	0.11	-1.9
1,427,348	-		ABZR87_RS06710	0.11	-0.8
1,427,348	-		ABZR87_RS06710	0.11	+1.0
1,427,348	-		ABZR87_RS06710	0.11	-1.3
1,427,348	-		ABZR87_RS06710	0.11	-1.6
1,427,348	-		ABZR87_RS06710	0.11	-0.4
1,427,348	-		ABZR87_RS06710	0.11	+0.5
1,427,348	-		ABZR87_RS06710	0.11	+2.5
1,427,441	-		ABZR87_RS06710	0.20	-1.0
1,427,441	-		ABZR87_RS06710	0.20	-0.5
1,427,524	+		ABZR87_RS06710	0.29	-0.4
1,427,524	+		ABZR87_RS06710	0.29	-0.8
1,427,524	+		ABZR87_RS06710	0.29	+0.3
1,427,524	+		ABZR87_RS06710	0.29	-2.1
1,427,524	+		ABZR87_RS06710	0.29	-1.1
1,427,524	+		ABZR87_RS06710	0.29	-1.1
1,427,524	+		ABZR87_RS06710	0.29	-1.6
1,427,524	+		ABZR87_RS06710	0.29	-0.4
1,427,524	+		ABZR87_RS06710	0.29	-0.4
1,427,524	+		ABZR87_RS06710	0.29	-1.1
1,427,524	+		ABZR87_RS06710	0.29	-1.0
1,427,524	+		ABZR87_RS06710	0.29	-1.2
1,427,524	+		ABZR87_RS06710	0.29	-1.0
1,427,525	-		ABZR87_RS06710	0.29	-1.0
1,427,525	-		ABZR87_RS06710	0.29	-0.7
1,427,525	-		ABZR87_RS06710	0.29	-0.6
1,427,525	-		ABZR87_RS06710	0.29	-1.9
1,427,525	-		ABZR87_RS06710	0.29	-0.6
1,427,525	-		ABZR87_RS06710	0.29	-0.6
1,427,525	-		ABZR87_RS06710	0.29	+0.7
1,427,525	-		ABZR87_RS06710	0.29	-0.5
1,427,525	-		ABZR87_RS06710	0.29	+0.4
1,427,525	-		ABZR87_RS06710	0.29	+0.0
1,427,525	-		ABZR87_RS06710	0.29	-0.9
1,427,525	-		ABZR87_RS06710	0.29	-1.1
1,427,839	+		ABZR87_RS06710	0.61	-0.7
1,427,839	+		ABZR87_RS06710	0.61	-2.3
1,427,839	+		ABZR87_RS06710	0.61	+0.5
1,427,839	+		ABZR87_RS06710	0.61	-2.2
1,427,839	+		ABZR87_RS06710	0.61	-0.9
1,427,839	+		ABZR87_RS06710	0.61	-0.8
1,427,839	+		ABZR87_RS06710	0.61	-0.5
1,427,839	+		ABZR87_RS06710	0.61	-1.8
1,427,839	+		ABZR87_RS06710	0.61	-1.7
1,427,839	+		ABZR87_RS06710	0.61	-1.4
1,427,839	+		ABZR87_RS06710	0.61	-0.2
1,427,839	+		ABZR87_RS06710	0.61	-1.5
1,427,839	+		ABZR87_RS06710	0.61	-0.6
1,427,840	-		ABZR87_RS06710	0.61	-0.7
1,427,840	-		ABZR87_RS06710	0.61	-0.8
1,427,840	-		ABZR87_RS06710	0.61	+0.5
1,427,840	-		ABZR87_RS06710	0.61	+0.2
1,427,840	-		ABZR87_RS06710	0.61	-0.5
1,427,840	-		ABZR87_RS06710	0.61	-0.4
1,427,840	-		ABZR87_RS06710	0.61	-1.4
1,427,840	-		ABZR87_RS06710	0.61	-1.9
1,427,840	-		ABZR87_RS06710	0.61	-1.3
1,427,840	-		ABZR87_RS06710	0.61	-2.2
1,427,840	-		ABZR87_RS06710	0.61	-0.9
1,427,840	-		ABZR87_RS06710	0.61	-0.8
1,427,961	+		ABZR87_RS06710	0.74	+0.5
1,427,961	+		ABZR87_RS06710	0.74	-0.5
1,428,073	+		ABZR87_RS06710	0.85	-3.0
1,428,073	+		ABZR87_RS06710	0.85	-0.0
1,428,073	+		ABZR87_RS06710	0.85	-0.1
1,428,074	-		ABZR87_RS06710	0.85	-0.9
1,428,074	-		ABZR87_RS06710	0.85	-0.7
1,428,074	-		ABZR87_RS06710	0.85	-0.5
1,428,074	-		ABZR87_RS06710	0.85	-0.2
1,428,074	-		ABZR87_RS06710	0.85	+0.8
1,428,074	-		ABZR87_RS06710	0.85	+0.5
1,428,074	-		ABZR87_RS06710	0.85	-2.1
1,428,074	-		ABZR87_RS06710	0.85	-0.6
1,428,074	-		ABZR87_RS06710	0.85	+0.4
1,428,093	+		ABZR87_RS06710	0.87	+0.1
1,428,093	+		ABZR87_RS06710	0.87	-0.1
1,428,093	+		ABZR87_RS06710	0.87	+1.1
1,428,094	-		ABZR87_RS06710	0.87	+1.3
1,428,094	-		ABZR87_RS06710	0.87	-1.2
1,428,094	-		ABZR87_RS06710	0.87	-1.4
1,428,215	-				-0.0
1,428,302	+				+0.2
1,428,302	+				-0.1
1,428,302	+				-0.3
1,428,302	+				+0.5
1,428,302	+				+0.2
1,428,303	-				-0.9
1,428,303	-				-0.4
1,428,314	+				+0.6
1,428,315	-				-0.3
1,428,406	-		ABZR87_RS06715	0.15	-1.2
1,428,406	-		ABZR87_RS06715	0.15	-2.4
1,428,406	-		ABZR87_RS06715	0.15	-1.7
1,428,643	-		ABZR87_RS06715	0.67	-4.1
1,428,703	+		ABZR87_RS06715	0.80	-1.3
1,428,704	-		ABZR87_RS06715	0.81	-0.0
1,428,704	-		ABZR87_RS06715	0.81	-3.2
1,428,704	-		ABZR87_RS06715	0.81	-3.0
1,428,704	-		ABZR87_RS06715	0.81	-0.1
1,428,759	+				+0.0
1,428,759	+				+0.7
1,428,759	+				+0.2
1,428,759	+				-2.5
1,428,759	+				+0.6
1,428,759	+				-0.2
1,428,759	+				+0.6
1,428,759	+				+0.1
1,428,759	+				+0.4
1,428,760	-				+0.5
1,428,760	-				+0.3
1,428,760	-				+0.5
1,428,760	-				+0.6
1,428,760	-				+0.6
1,428,760	-				+0.8
1,428,760	-				-0.1
1,428,760	-				+1.4
1,428,760	-				+0.2
1,428,760	-				-0.5
1,428,760	-				-0.4
1,428,760	-				+0.2
1,428,760	-				+0.7
1,428,774	+				+1.6
1,428,774	+				+1.0
1,428,775	-				+1.1
1,428,775	-				+1.3
1,428,775	-				+1.4
1,428,789	+				+1.4
1,428,789	+				+0.3
1,428,789	+				+0.9
1,428,789	+				+1.1
1,428,790	-				+0.8
1,428,790	-				+1.7
1,429,028	-				+0.5
1,429,073	+				-0.6
1,429,073	+				-1.3
1,429,073	+				+0.2
1,429,073	+				-2.0
1,429,073	+				-0.5
1,429,074	-				+0.9
1,429,074	-				+1.1
1,429,074	-				+1.3
1,429,074	-				+0.8
1,429,082	+				+1.2
1,429,082	+				+1.8
1,429,082	+				+1.3
1,429,082	+				+1.6
1,429,083	-				+1.4
1,429,083	-				+1.8
1,429,083	-				+1.5
1,429,083	-				+1.4
1,429,083	-				+1.4
1,429,094	+				+1.4
1,429,095	-				+1.1
1,429,095	-				+0.6
1,429,167	+				+1.6
1,429,167	+				+1.1
1,429,167	+				+1.5
1,429,167	+				+1.4
1,429,167	+				+1.2
1,429,167	+				+1.2
1,429,167	+				+1.3
1,429,168	-				+1.2
1,429,374	+		ABZR87_RS06725	0.17	+0.9
1,429,374	+		ABZR87_RS06725	0.17	+1.3
1,429,374	+		ABZR87_RS06725	0.17	+1.5
1,429,375	-		ABZR87_RS06725	0.17	+1.3
1,429,375	-		ABZR87_RS06725	0.17	+0.3
1,429,446	+		ABZR87_RS06725	0.21	+1.5
1,429,446	+		ABZR87_RS06725	0.21	+1.3
1,429,447	-		ABZR87_RS06725	0.21	+1.5
1,429,447	-		ABZR87_RS06725	0.21	+1.5
1,429,447	-		ABZR87_RS06725	0.21	+3.8
1,429,447	-		ABZR87_RS06725	0.21	+1.1
1,429,586	+		ABZR87_RS06725	0.29	+1.3
1,429,587	-		ABZR87_RS06725	0.29	+1.3
1,429,587	-		ABZR87_RS06725	0.29	+1.4
1,429,587	-		ABZR87_RS06725	0.29	+1.5
1,429,658	+		ABZR87_RS06725	0.33	+1.4
1,429,658	+		ABZR87_RS06725	0.33	+1.4
1,429,659	-		ABZR87_RS06725	0.33	+1.8
1,429,659	-		ABZR87_RS06725	0.33	+1.0
1,429,659	-		ABZR87_RS06725	0.33	+1.2
1,429,667	+		ABZR87_RS06725	0.34	+1.2
1,429,667	+		ABZR87_RS06725	0.34	+1.8
1,429,667	+		ABZR87_RS06725	0.34	+1.1
1,429,668	-		ABZR87_RS06725	0.34	-0.6
1,429,668	-		ABZR87_RS06725	0.34	+1.5
1,429,668	-		ABZR87_RS06725	0.34	+1.0
1,429,668	-		ABZR87_RS06725	0.34	-0.0
1,429,668	-		ABZR87_RS06725	0.34	+2.0
1,429,668	-		ABZR87_RS06725	0.34	+1.6
1,429,668	-		ABZR87_RS06725	0.34	+1.6
1,429,714	+		ABZR87_RS06725	0.37	+1.4
1,429,715	-		ABZR87_RS06725	0.37	+1.6
1,429,715	-		ABZR87_RS06725	0.37	+1.8
1,429,715	-		ABZR87_RS06725	0.37	+1.2
1,429,715	-		ABZR87_RS06725	0.37	+1.3
1,429,715	-		ABZR87_RS06725	0.37	+1.3