Strain Fitness in Sinorhizobium meliloti 1021 around SMc03746
Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,354,504 | + | SMc03245 | 0.42 | -1.1 | |
3,354,889 | - | SMc03245 | 0.72 | -0.2 | |
3,355,070 | + | SMc03245 | 0.86 | -0.5 | |
3,355,100 | - | SMc03245 | 0.88 | +1.2 | |
3,355,137 | + | -0.3 | |||
3,355,138 | - | -0.6 | |||
3,355,138 | - | -0.3 | |||
3,355,138 | - | -0.8 | |||
3,355,316 | + | -0.2 | |||
3,355,316 | + | -2.1 | |||
3,355,426 | + | SMc03746 | 0.65 | -0.2 | |
3,355,426 | + | SMc03746 | 0.65 | -1.2 | |
3,355,427 | - | SMc03746 | 0.66 | +0.6 | |
3,355,510 | + | -0.2 | |||
3,355,529 | + | -1.9 | |||
3,355,560 | - | +1.2 | |||
3,355,560 | - | +2.4 | |||
3,355,596 | + | -0.2 | |||
3,355,651 | - | -0.7 | |||
3,355,716 | - | +1.2 | |||
3,356,278 | + | -0.4 | |||
3,356,279 | - | +0.4 | |||
3,356,304 | + | +0.4 | |||
3,356,304 | + | -0.5 | |||
3,356,305 | - | +1.4 | |||
3,356,318 | + | +0.0 | |||
3,356,318 | + | -1.1 | |||
3,356,476 | - | -1.2 | |||
3,356,480 | + | -0.7 | |||
3,356,480 | + | +0.3 | |||
3,356,480 | + | +2.4 | |||
3,356,480 | + | +0.2 | |||
3,356,480 | + | -1.3 | |||
3,356,480 | + | -0.2 | |||
3,356,481 | - | +2.4 | |||
3,356,481 | - | +3.1 | |||
3,356,481 | - | -0.2 |
Or see this region's nucleotide sequence