Strain Fitness in Sinorhizobium meliloti 1021 around SMc03312

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
3,356,278	+				-0.4
3,356,279	-				+0.4
3,356,304	+				+0.4
3,356,304	+				-0.5
3,356,305	-				+1.4
3,356,318	+				+0.0
3,356,318	+				-1.1
3,356,476	-				-1.2
3,356,480	+				-0.7
3,356,480	+				+0.3
3,356,480	+				+2.4
3,356,480	+				+0.2
3,356,480	+				-1.3
3,356,480	+				-0.2
3,356,481	-				+2.4
3,356,481	-				+3.1
3,356,481	-				-0.2
3,356,482	+				+0.7
3,356,482	+				-0.1
3,356,482	+				+1.1
3,356,483	-				-0.4
3,356,483	-				-0.4
3,356,483	-				-0.8
3,356,483	-				-0.1
3,356,483	-				+0.7
3,356,771	+		SMc03748	0.45	+0.0
3,356,903	+		SMc03748	0.61	-1.2
3,356,903	+		SMc03748	0.61	-0.3
3,356,904	-		SMc03748	0.61	+0.5
3,356,904	-		SMc03748	0.61	+0.4
3,356,904	-		SMc03748	0.61	+0.1
3,357,110	-		SMc03748	0.86	+0.2
3,357,206	+				-0.8
3,357,237	+				+0.5
3,357,237	+				-0.5
3,357,238	-				-3.2
3,357,238	-				+0.3
3,357,263	+				-0.1
3,357,263	+				+1.2
3,357,263	+				-0.7
3,357,271	+				-0.4
3,357,272	-				+0.1
3,357,272	-				+0.5
3,357,272	-				-0.5
3,357,272	-				+0.2
3,357,272	-				-0.4
3,357,275	+				+0.1
3,357,275	+				-0.5
3,357,275	+				-1.9
3,357,275	+				-2.4
3,357,275	+				-0.5
3,357,275	+				+0.4
3,357,275	+				-1.5
3,357,275	+				-0.0
3,357,275	+				-0.1
3,357,276	-				+0.1
3,357,276	-				+1.9
3,357,276	-				+0.8
3,357,276	-				+0.1
3,357,276	-				-0.1
3,357,276	-				-0.3
3,357,276	-				+0.7
3,357,276	-				+0.2
3,357,292	-		SMc03312	0.10	-1.0
3,358,302	+				-0.0
3,358,318	+				+1.1
3,358,318	+				-0.3
3,358,377	-				+1.4
3,358,385	-				-0.9
3,358,390	-				-1.4
3,358,390	-				-0.3
3,358,467	+				+0.2
3,358,672	+				-0.7
3,358,679	-				+0.2
3,358,684	+		SMc03246	0.10	-0.6
3,358,716	+		SMc03246	0.13	+1.2
3,358,724	+		SMc03246	0.13	-1.1
3,358,752	+		SMc03246	0.16	+1.6
3,358,753	-		SMc03246	0.16	-0.6
3,358,753	-		SMc03246	0.16	+1.6
3,358,861	+		SMc03246	0.25	-0.3
3,358,861	+		SMc03246	0.25	-0.3
3,358,862	-		SMc03246	0.25	-0.4