Strain Fitness in Sinorhizobium meliloti 1021 around SMc03148

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
3,178,236	+				+0.0
3,178,236	+				+0.0
3,178,236	+				-1.0
3,178,236	+				-1.3
3,178,236	+				+0.9
3,178,237	-				+0.5
3,178,237	-				+0.2
3,178,240	+				-0.0
3,178,240	+				-1.1
3,178,240	+				-0.8
3,178,240	+				-0.4
3,178,351	-				-0.0
3,178,491	-				+1.1
3,178,528	+				-0.1
3,178,529	-				+0.0
3,178,542	+				+1.2
3,178,542	+				-0.8
3,178,543	-				-0.3
3,178,777	+		SMc03149	0.42	+0.2
3,178,777	+		SMc03149	0.42	-0.9
3,178,778	-		SMc03149	0.43	-3.1
3,178,778	-		SMc03149	0.43	-1.7
3,178,810	-		SMc03149	0.48	-1.1
3,178,810	-		SMc03149	0.48	+0.2
3,178,834	+		SMc03149	0.53	+1.3
3,178,834	+		SMc03149	0.53	-1.3
3,178,834	+		SMc03149	0.53	-0.5
3,178,834	+		SMc03149	0.53	+0.2
3,178,835	-		SMc03149	0.53	-0.2
3,178,835	-		SMc03149	0.53	+0.8
3,178,875	+		SMc03149	0.60	-0.2
3,179,097	+				-0.5
3,179,098	-				+1.9
3,179,272	+				-0.7
3,179,272	+				+0.5
3,179,306	+				-2.2
3,179,306	+				-0.2
3,179,306	+				+2.3
3,179,307	-				+2.2
3,179,309	-				-0.1
3,179,309	-				-0.1
3,179,309	-				-0.2
3,179,319	+				+0.3
3,179,371	-				+0.3
3,179,374	+				+2.3
3,179,374	+				+0.8
3,179,375	-				-1.2
3,179,375	-				-0.2
3,179,375	-				+0.3
3,179,375	-				+0.3
3,179,415	+				+0.7
3,179,433	+				-1.1
3,179,433	+				-0.5
3,179,433	+				-0.3
3,179,434	-				+0.3
3,179,448	+		SMc03148	0.11	-0.8
3,179,483	-		SMc03148	0.12	-0.0
3,179,483	-		SMc03148	0.12	-1.0
3,179,483	-		SMc03148	0.12	-0.3
3,179,483	-		SMc03148	0.12	-0.4
3,179,598	-		SMc03148	0.18	-0.4
3,179,636	+		SMc03148	0.20	-0.5
3,179,636	+		SMc03148	0.20	-0.0
3,179,636	+		SMc03148	0.20	-0.5
3,179,636	+		SMc03148	0.20	+0.3
3,179,636	+		SMc03148	0.20	-0.9
3,179,637	-		SMc03148	0.20	-2.3
3,179,637	-		SMc03148	0.20	-0.2
3,179,640	+		SMc03148	0.20	-1.1
3,179,640	+		SMc03148	0.20	+1.9
3,179,640	+		SMc03148	0.20	-0.2
3,179,640	+		SMc03148	0.20	+0.6
3,179,640	+		SMc03148	0.20	-0.0
3,179,641	-		SMc03148	0.20	-0.5
3,179,641	-		SMc03148	0.20	-0.8
3,179,641	-		SMc03148	0.20	-1.1
3,179,641	-		SMc03148	0.20	+0.3
3,179,988	+		SMc03148	0.37	-0.2
3,179,989	-		SMc03148	0.37	+0.3
3,180,198	+		SMc03148	0.47	-0.4
3,180,199	-		SMc03148	0.47	+0.3
3,180,208	+		SMc03148	0.47	+0.9
3,180,228	+		SMc03148	0.48	+0.1
3,180,228	+		SMc03148	0.48	+0.1
3,180,229	-		SMc03148	0.49	-1.5
3,180,229	-		SMc03148	0.49	+0.3
3,180,229	-		SMc03148	0.49	+0.4
3,180,229	-		SMc03148	0.49	+0.3
3,180,229	-		SMc03148	0.49	-1.2
3,180,273	-		SMc03148	0.51	-0.6
3,180,273	-		SMc03148	0.51	-0.8
3,180,310	+		SMc03148	0.52	-0.0
3,180,310	+		SMc03148	0.52	+0.3
3,180,310	+		SMc03148	0.52	-0.2
3,180,310	+		SMc03148	0.52	-1.2
3,180,311	-		SMc03148	0.53	+0.9
3,180,311	-		SMc03148	0.53	+0.3
3,180,311	-		SMc03148	0.53	-0.7
3,180,311	-		SMc03148	0.53	-0.0
3,180,311	-		SMc03148	0.53	-0.7
3,180,311	-		SMc03148	0.53	+0.9
3,180,311	-		SMc03148	0.53	-0.1
3,180,311	-		SMc03148	0.53	+0.9
3,180,450	+		SMc03148	0.59	-0.8
3,180,450	+		SMc03148	0.59	-0.1
3,180,450	+		SMc03148	0.59	-1.1
3,180,451	-		SMc03148	0.59	-0.1
3,180,451	-		SMc03148	0.59	+1.0
3,180,512	-		SMc03148	0.62	-3.4
3,180,570	+		SMc03148	0.65	-0.4
3,180,571	-		SMc03148	0.65	-0.2
3,180,636	+		SMc03148	0.68	-0.1
3,180,636	+		SMc03148	0.68	-0.1
3,180,769	-		SMc03148	0.75	+0.4
3,180,809	+		SMc03148	0.77	-0.2
3,180,809	+		SMc03148	0.77	+1.9
3,180,809	+		SMc03148	0.77	+0.8
3,180,810	-		SMc03148	0.77	-0.0
3,180,810	-		SMc03148	0.77	+0.3
3,180,853	-		SMc03148	0.79	-1.4
3,180,853	-		SMc03148	0.79	-1.6
3,181,001	+		SMc03148	0.86	-0.0
3,181,022	+		SMc03148	0.87	-0.4
3,181,022	+		SMc03148	0.87	-1.6
3,181,068	+		SMc03148	0.89	-0.0
3,181,068	+		SMc03148	0.89	-0.5
3,181,068	+		SMc03148	0.89	-1.4
3,181,068	+		SMc03148	0.89	+0.7
3,181,068	+		SMc03148	0.89	-0.6
3,181,068	+		SMc03148	0.89	-1.4
3,181,068	+		SMc03148	0.89	+2.1
3,181,068	+		SMc03148	0.89	+0.3
3,181,069	-		SMc03148	0.89	-0.4
3,181,069	-		SMc03148	0.89	-0.6
3,181,069	-		SMc03148	0.89	-0.3
3,181,087	-				-0.2
3,181,118	-				-0.2
3,181,118	-				+0.1
3,181,271	+				-0.7
3,181,271	+				-0.1
3,181,271	+				-0.3
3,181,272	-				-0.0
3,181,272	-				+0.6
3,181,272	-				+0.2
3,181,277	-				-1.2
3,181,411	+				-1.1
3,181,411	+				+0.6
3,181,412	-				+0.3
3,181,880	-		SMc03147	0.25	+0.6
3,182,098	+		SMc03147	0.35	+0.1
3,182,105	+		SMc03147	0.36	-2.5
3,182,203	+		SMc03147	0.40	-1.2
3,182,203	+		SMc03147	0.40	+0.3
3,182,203	+		SMc03147	0.40	+0.1
3,182,203	+		SMc03147	0.40	-0.7
3,182,204	-		SMc03147	0.40	-1.2
3,182,211	-		SMc03147	0.41	+0.0
3,182,247	+		SMc03147	0.42	-0.2
3,182,247	+		SMc03147	0.42	-0.5
3,182,248	-		SMc03147	0.42	+1.5
3,182,269	+		SMc03147	0.43	-1.4
3,182,270	-		SMc03147	0.44	+0.5