Strain Fitness in Sinorhizobium meliloti 1021 around SMc01430

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
2,273,269	+		SMc01429	0.20	+0.2
2,273,434	+		SMc01429	0.39	+0.0
2,273,434	+		SMc01429	0.39	-0.8
2,273,608	+		SMc01429	0.60	-2.4
2,273,609	-		SMc01429	0.60	-0.8
2,273,610	+		SMc01429	0.60	+0.2
2,274,081	+				-0.5
2,274,082	-				+1.0
2,274,121	+				-1.2
2,274,121	+				+0.1
2,274,121	+				+0.6
2,274,122	-				+0.2
2,274,135	-				+0.0
2,274,157	+				+0.5
2,274,157	+				-0.6
2,274,157	+				+0.9
2,274,157	+				+2.2
2,274,157	+				-0.4
2,274,158	-				+0.1
2,274,158	-				-0.2
2,274,158	-				-2.2
2,274,369	+		SMc01430	0.37	+0.1
2,274,369	+		SMc01430	0.37	+0.2
2,274,370	-		SMc01430	0.37	+0.6
2,274,584	-		SMc01430	0.75	+0.8
2,274,694	+				+0.1
2,274,695	-				-2.1
2,274,741	-				-1.0
2,275,022	+		SMc01431	0.15	+0.3
2,275,080	+		SMc01431	0.18	-0.6
2,275,080	+		SMc01431	0.18	+1.0
2,275,080	+		SMc01431	0.18	+0.4
2,275,080	+		SMc01431	0.18	+1.2
2,275,080	+		SMc01431	0.18	+0.2
2,275,081	-		SMc01431	0.19	+0.0
2,275,081	-		SMc01431	0.19	+0.6
2,275,081	-		SMc01431	0.19	-0.4
2,275,081	-		SMc01431	0.19	-0.0
2,275,081	-		SMc01431	0.19	-0.1
2,275,081	-		SMc01431	0.19	-1.4
2,275,081	-		SMc01431	0.19	+0.0
2,275,081	-		SMc01431	0.19	-0.3
2,275,082	+		SMc01431	0.19	+0.2
2,275,082	+		SMc01431	0.19	+0.6
2,275,082	+		SMc01431	0.19	-0.5
2,275,082	+		SMc01431	0.19	-0.9
2,275,082	+		SMc01431	0.19	+0.4
2,275,082	+		SMc01431	0.19	+0.9
2,275,082	+		SMc01431	0.19	-0.4
2,275,083	-		SMc01431	0.19	+0.2
2,275,083	-		SMc01431	0.19	+1.7
2,275,121	+		SMc01431	0.21	+0.8
2,275,121	+		SMc01431	0.21	+0.4
2,275,343	+				+0.8
2,275,370	+		SMc01431	0.35	-0.0
2,275,371	-		SMc01431	0.35	+1.8
2,275,371	-		SMc01431	0.35	+0.9
2,275,388	+		SMc01431	0.36	-1.7
2,275,422	-		SMc01431	0.38	+0.1
2,275,724	+		SMc01431	0.55	+0.3