Strain Fitness in Sinorhizobium meliloti 1021 around SMc01258

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
1,515,772	+		SMc01260	0.37	+0.3
1,515,773	-		SMc01260	0.38	-0.8
1,515,840	+		SMc01260	0.55	+0.1
1,515,841	-		SMc01260	0.55	-0.3
1,515,947	+		SMc01260	0.83	-0.6
1,515,947	+		SMc01260	0.83	-0.6
1,515,947	+		SMc01260	0.83	+0.5
1,515,948	-		SMc01260	0.83	-1.8
1,516,080	-				+1.2
1,516,417	+		SMc01259	0.38	+0.8
1,516,417	+		SMc01259	0.38	-1.6
1,516,502	+		SMc01259	0.55	-0.3
1,516,503	-		SMc01259	0.56	-0.3
1,516,717	+				-0.5
1,516,718	-				-0.4
1,516,718	-				+0.8
1,516,930	+		SMc01258	0.21	-0.1
1,516,931	-		SMc01258	0.21	-0.2
1,517,017	+		SMc01258	0.29	-0.7
1,517,017	+		SMc01258	0.29	-0.1
1,517,019	+		SMc01258	0.30	-0.3
1,517,020	-		SMc01258	0.30	+1.7
1,517,179	+		SMc01258	0.45	-2.0
1,517,257	+		SMc01258	0.53	-0.5
1,517,257	+		SMc01258	0.53	+0.5
1,517,258	-		SMc01258	0.53	-0.9
1,517,449	-		SMc01258	0.72	+1.4
1,517,617	+		SMc01258	0.88	-1.1
1,517,618	-		SMc01258	0.88	-0.3
1,517,769	+				-0.2
1,517,770	-				+0.2
1,517,770	-				+0.5
1,517,803	-				+0.3
1,517,803	-				+0.7
1,517,880	-				+0.4
1,517,976	-		SMc01257	0.14	+0.9
1,517,983	+		SMc01257	0.15	-2.0
1,517,983	+		SMc01257	0.15	-0.6
1,517,984	-		SMc01257	0.15	+0.9
1,518,055	+		SMc01257	0.26	+0.6
1,518,055	+		SMc01257	0.26	-2.1
1,518,056	-		SMc01257	0.26	+0.1
1,518,056	-		SMc01257	0.26	-0.3
1,518,056	-		SMc01257	0.26	+0.7
1,518,056	-		SMc01257	0.26	+0.1
1,518,056	-		SMc01257	0.26	+1.0
1,518,156	-		SMc01257	0.40	-0.0
1,518,170	+		SMc01257	0.42	+0.6
1,518,260	-		SMc01257	0.55	+0.7
1,518,465	+		SMc01257	0.85	-0.7
1,518,465	+		SMc01257	0.85	-1.4
1,518,552	-				-1.0
1,518,567	+				-0.4
1,518,567	+				+0.1
1,518,626	-				+1.1