Strain Fitness in Sinorhizobium meliloti 1021 around SMc01137

Experiment: D-Cycloserine 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc01138 and SMc01137 are separated by 13 nucleotidesSMc01137 and SMc01136 are separated by 31 nucleotides SMc01138: SMc01138 - ABC transporter ATP-binding protein, at 412,984 to 413,796 SMc01138 SMc01137: SMc01137 - hypothetical protein, at 413,810 to 414,370 SMc01137 SMc01136: SMc01136 - hypothetical protein, at 414,402 to 415,070 SMc01136 Position (kb) 413 414 415Strain fitness (log2 ratio) -2 -1 0 1 2 3at 412.870 kb on + strandat 415.125 kb on - strandat 415.219 kb on - strandat 415.304 kb on - strandat 415.304 kb on - strandat 415.329 kb on - strandat 415.329 kb on - strandat 415.333 kb on + strandat 415.333 kb on + strandat 415.334 kb on - strandat 415.356 kb on + strandat 415.356 kb on + strandat 415.356 kb on + strandat 415.357 kb on - strandat 415.357 kb on - strandat 415.357 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml
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412,870 + -0.0
415,125 - -1.2
415,219 - +0.8
415,304 - +1.1
415,304 - +0.8
415,329 - +0.2
415,329 - +0.5
415,333 + +2.4
415,333 + -1.4
415,334 - -0.1
415,356 + -1.2
415,356 + -0.7
415,356 + -1.4
415,357 - -2.3
415,357 - -0.0
415,357 - +2.9

Or see this region's nucleotide sequence