Strain Fitness in Sinorhizobium meliloti 1021 around SMc00893
Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
889,693 | + | +1.2 | |||
889,693 | + | +0.1 | |||
889,694 | - | -0.1 | |||
889,694 | - | -0.8 | |||
889,694 | - | -0.9 | |||
889,725 | + | +1.1 | |||
889,726 | - | -0.5 | |||
889,753 | - | SMc00893 | 0.12 | -0.1 | |
889,753 | - | SMc00893 | 0.12 | -0.6 | |
889,874 | + | SMc00893 | 0.29 | -1.9 | |
889,874 | + | SMc00893 | 0.29 | -0.1 | |
889,875 | - | SMc00893 | 0.30 | +0.3 | |
889,919 | + | SMc00893 | 0.36 | -0.7 | |
889,919 | + | SMc00893 | 0.36 | -2.0 | |
889,974 | + | SMc00893 | 0.43 | +0.1 | |
889,974 | + | +2.2 | |||
889,974 | + | SMc00893 | 0.43 | -1.8 | |
889,974 | + | SMc00893 | 0.43 | -1.4 | |
889,975 | - | SMc00893 | 0.44 | +0.4 | |
889,975 | - | SMc00893 | 0.44 | -1.1 | |
889,975 | - | SMc00893 | 0.44 | -0.0 | |
890,107 | - | SMc00893 | 0.62 | -0.4 | |
890,107 | - | SMc00893 | 0.62 | -1.3 | |
890,107 | - | SMc00893 | 0.62 | -1.2 | |
890,107 | - | SMc00893 | 0.62 | -0.2 | |
890,116 | - | SMc00893 | 0.63 | -0.3 | |
890,243 | + | SMc00893 | 0.81 | -2.9 | |
890,243 | + | SMc00893 | 0.81 | -0.9 | |
890,243 | + | SMc00893 | 0.81 | +0.2 | |
890,244 | - | SMc00893 | 0.81 | +0.0 | |
890,244 | - | SMc00893 | 0.81 | +0.2 | |
890,345 | + | +0.1 | |||
890,346 | - | +1.1 | |||
890,513 | + | -0.5 |
Or see this region's nucleotide sequence