Strain Fitness in Sinorhizobium meliloti 1021 around SMc00042

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
1,064,410	+		SMc00105	0.24	-1.0
1,064,410	+		SMc00105	0.24	+0.7
1,064,410	+		SMc00105	0.24	-1.1
1,064,411	-		SMc00105	0.24	+0.3
1,064,411	-		SMc00105	0.24	+0.2
1,064,411	-		SMc00105	0.24	+0.9
1,064,844	+		SMc00105	0.65	+0.6
1,064,844	+		SMc00105	0.65	-0.1
1,064,845	-		SMc00105	0.65	+0.0
1,064,905	+		SMc00105	0.71	-0.3
1,064,906	-		SMc00105	0.71	-1.2
1,064,954	+		SMc00105	0.76	-1.3
1,064,979	+		SMc00105	0.78	-0.9
1,065,190	-				-0.4
1,065,190	-				+0.5
1,065,192	+				+2.3
1,065,192	+				-2.4
1,065,192	+				+2.2
1,065,193	-				-0.1
1,065,292	+				+0.0
1,065,292	+				+1.0
1,065,292	+				-0.5
1,065,293	-				+0.4
1,065,293	-				-0.3
1,065,293	-				+0.4
1,065,372	+				-2.2
1,065,372	+				-1.8
1,065,372	+				+0.3
1,065,373	-				+1.0
1,065,373	-				-0.2
1,065,373	-				-1.1
1,065,373	-				+0.2
1,065,373	-				+0.1
1,065,649	+		SMc00042	0.33	-3.5
1,065,649	+		SMc00042	0.33	+0.0
1,065,650	-		SMc00042	0.33	-1.9
1,065,650	-		SMc00042	0.33	+0.1
1,065,650	-		SMc00042	0.33	+0.5
1,065,665	-		SMc00042	0.34	+0.4
1,065,665	-		SMc00042	0.34	-0.2
1,065,665	-		SMc00042	0.34	+0.3
1,065,665	-		SMc00042	0.34	+0.5
1,065,665	-		SMc00042	0.34	-0.2
1,066,123	-		SMc00042	0.86	+0.4
1,066,127	-		SMc00042	0.87	-0.5
1,066,127	-		SMc00042	0.87	-0.0
1,066,127	-		SMc00042	0.87	-1.2
1,066,207	+				+0.7
1,066,208	-				+0.4
1,066,257	-				-0.6
1,066,271	-				-0.2
1,066,272	+				+0.1
1,066,273	-				+1.2
1,066,273	-				+0.1
1,066,288	-				-0.8
1,066,391	+				-1.4
1,066,392	-				+2.2
1,066,496	+		SMc00106	0.26	-0.5
1,066,496	+		SMc00106	0.26	+0.8
1,066,500	-		SMc00106	0.27	+0.2
1,066,500	-		SMc00106	0.27	-1.0
1,066,500	-		SMc00106	0.27	+0.8
1,066,512	-		SMc00106	0.30	+3.2
1,066,628	+		SMc00106	0.58	+0.5
1,066,685	+		SMc00106	0.72	-0.2
1,066,845	+				-0.9
1,066,845	+				-0.7
1,066,845	+				-1.1
1,066,845	+				-0.6
1,066,845	+				-1.0
1,066,845	+				-0.1
1,066,846	-				+0.7
1,066,846	-				+1.3
1,066,846	-				-0.6
1,066,846	-				+0.1
1,066,846	-				-1.4
1,066,846	-				-0.4
1,066,851	-				+0.4
1,066,851	-				+0.0
1,066,851	-				-1.2
1,066,851	-				-0.4
1,066,851	-				-2.1
1,066,916	+				-0.5
1,066,978	+				-1.8
1,066,978	+				+0.2
1,066,978	+				-0.1
1,066,978	+				+0.4
1,066,978	+				-0.4
1,066,979	-				+1.8