Strain Fitness in Sinorhizobium meliloti 1021 around SMa2032
Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,148,190 | - | -1.3 | |||
1,148,224 | + | +0.3 | |||
1,148,288 | + | SMa2029 | 0.12 | +0.4 | |
1,148,289 | - | SMa2029 | 0.12 | -0.8 | |
1,148,323 | + | SMa2029 | 0.17 | -0.8 | |
1,148,359 | - | SMa2029 | 0.22 | +2.8 | |
1,148,359 | - | SMa2029 | 0.22 | +0.5 | |
1,148,442 | + | SMa2029 | 0.35 | +0.5 | |
1,148,480 | - | SMa2029 | 0.41 | -0.2 | |
1,148,813 | + | +0.4 | |||
1,148,814 | - | +0.8 | |||
1,148,814 | - | +0.6 | |||
1,149,121 | + | +0.6 | |||
1,149,122 | - | -1.1 | |||
1,149,122 | - | +0.2 | |||
1,149,466 | + | -0.4 | |||
1,149,467 | - | -0.2 | |||
1,149,486 | - | +1.2 | |||
1,149,500 | + | -1.7 | |||
1,149,783 | - | -0.7 | |||
1,149,930 | - | -0.6 | |||
1,150,110 | + | SMa2033 | 0.24 | -0.7 | |
1,150,110 | + | SMa2033 | 0.24 | -0.5 | |
1,150,111 | - | SMa2033 | 0.25 | -0.2 | |
1,150,118 | - | SMa2033 | 0.25 | -0.5 | |
1,150,178 | + | SMa2033 | 0.33 | +0.8 |
Or see this region's nucleotide sequence