Strain Fitness in Sinorhizobium meliloti 1021 around SMa1945

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
1,103,195	+				+0.1
1,103,216	+				+0.5
1,103,216	+				-0.4
1,103,231	+				+0.3
1,103,358	-				-0.2
1,103,381	+				+0.2
1,103,441	-				-0.0
1,103,485	-				-1.2
1,103,487	+				-2.1
1,103,487	+				-0.5
1,103,538	+				-0.7
1,103,539	-				+0.1
1,103,763	-		SMa1943	0.11	+0.2
1,103,943	+		SMa1943	0.51	+1.0
1,103,943	+		SMa1943	0.51	+0.2
1,103,944	-		SMa1943	0.51	+0.2
1,104,196	+				-0.0
1,104,196	+				+2.9
1,104,197	-				-0.8
1,104,197	-				-1.7
1,104,197	-				-0.2
1,104,197	-				-0.2
1,104,333	+		SMa1945	0.18	+0.6
1,104,371	+		SMa1945	0.22	+0.8
1,104,371	+		SMa1945	0.22	+0.5
1,104,492	+				+1.3
1,104,637	+		SMa1945	0.53	+0.9
1,104,638	-		SMa1945	0.53	+0.6
1,104,638	-		SMa1945	0.53	-0.0
1,104,745	-		SMa1945	0.66	+0.3
1,105,101	-				-0.7
1,105,180	+				+1.1
1,105,180	+				+0.9
1,105,199	+				-0.4
1,105,199	+				+0.1
1,105,200	-				+0.2
1,105,205	-				+0.7
1,105,205	-				-0.2
1,105,205	-				+1.7
1,105,217	+				-0.3
1,105,244	+				-0.7
1,105,274	+				-0.5
1,105,295	-				-0.2
1,105,395	+				+0.5
1,105,530	-				+1.8
1,105,547	+				+0.6
1,105,547	+				-2.2
1,105,548	-				+0.0
1,105,604	+				+0.4
1,105,605	-				-0.8
1,105,605	-				+0.6
1,105,706	+				+0.2
1,105,729	+				-0.9
1,105,730	-				-0.8
1,105,730	-				-0.2
1,105,740	-				+0.4
1,105,742	+				-0.2
1,105,756	-				+0.5
1,105,878	+				-1.6
1,105,878	+				-1.0
1,105,879	-				-0.1
1,105,879	-				-0.9
1,105,905	+		SMa1948	0.13	-0.3
1,105,932	-		SMa1948	0.16	+0.0
1,105,955	-		SMa1948	0.20	+0.8
1,105,955	-		SMa1948	0.20	-1.5
1,105,968	+		SMa1948	0.21	+0.3
1,105,968	+		SMa1948	0.21	+1.0