Strain Fitness in Sinorhizobium meliloti 1021 around SMa1711
Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
962,678 | + | -0.2 | |||
962,727 | + | +0.2 | |||
963,111 | + | SMa1706 | 0.71 | +1.7 | |
963,137 | - | SMa1706 | 0.77 | +0.2 | |
963,249 | + | +0.7 | |||
963,250 | - | -0.1 | |||
963,366 | + | +0.4 | |||
963,366 | + | -1.3 | |||
963,503 | + | -0.5 | |||
963,504 | - | +0.0 | |||
963,504 | - | +0.1 | |||
963,504 | - | +0.3 | |||
963,508 | + | -0.3 | |||
963,508 | + | +0.0 | |||
963,509 | - | -1.5 | |||
963,549 | - | +0.4 | |||
963,564 | - | -0.5 | |||
963,590 | - | -2.2 | |||
963,590 | - | -0.7 | |||
963,627 | - | +0.1 | |||
963,662 | + | -1.0 | |||
963,805 | + | SMa1711 | 0.18 | -1.0 | |
964,033 | + | SMa1711 | 0.43 | +0.0 | |
964,076 | + | SMa1711 | 0.48 | +0.6 | |
964,162 | + | SMa1711 | 0.58 | -0.8 | |
964,163 | - | SMa1711 | 0.58 | -0.5 | |
964,163 | - | SMa1711 | 0.58 | -0.7 | |
964,393 | - | SMa1711 | 0.83 | -0.3 | |
964,455 | - | -0.4 | |||
964,506 | + | +0.5 | |||
964,806 | + | -1.4 | |||
964,806 | + | -0.2 | |||
965,137 | + | -0.1 | |||
965,137 | + | -0.7 | |||
965,138 | - | -0.0 | |||
965,214 | + | -0.1 | |||
965,292 | + | +0.5 | |||
965,331 | - | +1.0 | |||
965,336 | + | -0.1 | |||
965,336 | + | +0.8 | |||
965,336 | + | +0.1 | |||
965,336 | + | +0.0 | |||
965,336 | + | +0.6 | |||
965,336 | + | +0.5 | |||
965,337 | - | +0.1 | |||
965,337 | - | +0.3 | |||
965,337 | - | +1.2 | |||
965,337 | - | -0.1 | |||
965,337 | - | +0.3 | |||
965,382 | + | +0.0 | |||
965,471 | + | +0.7 | |||
965,471 | + | -0.3 | |||
965,472 | - | -0.1 | |||
965,472 | - | +0.7 | |||
965,521 | + | -0.7 | |||
965,522 | - | +1.5 | |||
965,522 | - | -0.5 | |||
965,524 | + | +0.5 | |||
965,524 | + | +0.9 | |||
965,524 | + | +1.3 | |||
965,525 | - | -0.0 |
Or see this region's nucleotide sequence