Strain Fitness in Sinorhizobium meliloti 1021 around SMa0857
Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
472,748 | + | +0.5 | |||
472,749 | - | -2.6 | |||
472,749 | - | +1.7 | |||
474,617 | - | SMa0857 | 0.50 | +0.7 | |
474,617 | - | SMa0857 | 0.50 | -0.1 | |
474,617 | - | SMa0857 | 0.50 | -0.4 | |
474,617 | - | SMa0857 | 0.50 | +0.1 | |
475,137 | - | SMa0857 | 0.77 | -0.1 | |
475,444 | - | -0.0 | |||
475,483 | + | +0.5 | |||
475,485 | + | -0.2 | |||
475,485 | + | -1.3 | |||
475,486 | - | +3.0 | |||
475,486 | - | -0.4 | |||
475,586 | + | -0.7 | |||
475,587 | - | +1.3 | |||
475,600 | - | -0.4 | |||
475,655 | + | -0.1 | |||
475,655 | + | -1.6 | |||
475,655 | + | -1.0 | |||
475,657 | + | +1.1 | |||
475,672 | - | -0.2 | |||
475,725 | - | -0.3 | |||
475,794 | + | +0.8 | |||
475,795 | - | +0.0 | |||
475,815 | + | -0.0 | |||
475,815 | + | +0.1 | |||
475,816 | - | +0.4 | |||
475,816 | - | +0.8 | |||
475,896 | + | +0.1 | |||
475,896 | + | +0.6 | |||
475,897 | - | -0.9 | |||
476,179 | + | SMa0861 | 0.25 | -0.8 | |
476,379 | - | SMa0861 | 0.48 | +0.6 | |
476,379 | - | SMa0861 | 0.48 | +0.1 | |
476,485 | + | SMa0861 | 0.60 | +0.2 | |
476,496 | + | SMa0861 | 0.61 | -0.5 | |
476,497 | - | SMa0861 | 0.61 | +1.2 | |
476,497 | - | SMa0861 | 0.61 | +0.1 |
Or see this region's nucleotide sequence