Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21098 and SM_b21099 are separated by 170 nucleotides SM_b21099 and SM_b21100 are separated by 10 nucleotides
SM_b21098: SM_b21098 - hypothetical protein, at 740,599 to 741,396
_b21098
SM_b21099: SM_b21099 - hypothetical protein, at 741,567 to 741,989
_b21099
SM_b21100: SM_b21100 - polysaccharide deacetylase, at 742,000 to 742,878
_b21100
Position (kb) 741
742 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 740.641 kb on + strand at 741.038 kb on - strand, within SM_b21098 at 741.364 kb on + strand at 741.365 kb on - strand at 741.417 kb on + strand at 741.417 kb on + strand at 741.417 kb on + strand at 741.418 kb on - strand at 741.642 kb on + strand, within SM_b21099 at 741.643 kb on - strand, within SM_b21099 at 741.643 kb on - strand, within SM_b21099 at 741.643 kb on - strand, within SM_b21099 at 741.706 kb on + strand, within SM_b21099 at 741.714 kb on - strand, within SM_b21099 at 741.714 kb on - strand, within SM_b21099 at 741.714 kb on - strand, within SM_b21099 at 742.006 kb on + strand at 742.006 kb on + strand at 742.007 kb on - strand at 742.007 kb on - strand at 742.178 kb on - strand, within SM_b21100 at 742.291 kb on - strand, within SM_b21100 at 742.478 kb on - strand, within SM_b21100 at 742.478 kb on - strand, within SM_b21100 at 742.887 kb on - strand at 742.915 kb on + strand at 742.945 kb on + strand at 742.946 kb on - strand at 742.976 kb on + strand at 742.976 kb on + strand at 742.976 kb on + strand at 742.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 740,641 + +0.1 741,038 - SM_b21098 0.55 -0.5 741,364 + -0.3 741,365 - +0.2 741,417 + -1.4 741,417 + +0.5 741,417 + -2.4 741,418 - -1.4 741,642 + SM_b21099 0.18 -1.0 741,643 - SM_b21099 0.18 -0.1 741,643 - SM_b21099 0.18 -1.1 741,643 - SM_b21099 0.18 -1.2 741,706 + SM_b21099 0.33 -0.3 741,714 - SM_b21099 0.35 -1.0 741,714 - SM_b21099 0.35 -0.9 741,714 - SM_b21099 0.35 -0.2 742,006 + -0.5 742,006 + +0.4 742,007 - +1.0 742,007 - -2.9 742,178 - SM_b21100 0.20 +1.8 742,291 - SM_b21100 0.33 -1.8 742,478 - SM_b21100 0.54 -0.8 742,478 - SM_b21100 0.54 +0.3 742,887 - -0.1 742,915 + -0.2 742,945 + +1.1 742,946 - -1.2 742,976 + -0.1 742,976 + +0.0 742,976 + -0.6 742,977 - -3.2
Or see this region's nucleotide sequence