Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21091 and SM_b21092 are separated by 4 nucleotides SM_b21092 and SM_b21093 are separated by 24 nucleotides
SM_b21091: SM_b21091 - cell-wall lytic enzyme, muramidase (lysozyme) protein, at 733,897 to 734,907
_b21091
SM_b21092: SM_b21092 - acetyltransferase, at 734,912 to 735,388
_b21092
SM_b21093: SM_b21093 - LysR family transcriptional regulator, at 735,413 to 736,315
_b21093
Position (kb) 734
735
736 Strain fitness (log2 ratio) -2
-1
0
1 at 735.125 kb on + strand, within SM_b21092 at 735.170 kb on + strand, within SM_b21092 at 735.171 kb on - strand, within SM_b21092 at 735.305 kb on + strand, within SM_b21092 at 735.306 kb on - strand, within SM_b21092 at 735.323 kb on - strand, within SM_b21092 at 735.577 kb on + strand, within SM_b21093 at 735.639 kb on + strand, within SM_b21093 at 735.640 kb on - strand, within SM_b21093 at 735.640 kb on - strand, within SM_b21093 at 735.640 kb on - strand, within SM_b21093 at 735.702 kb on + strand, within SM_b21093 at 735.703 kb on - strand, within SM_b21093 at 735.703 kb on - strand, within SM_b21093 at 735.792 kb on + strand, within SM_b21093 at 735.792 kb on + strand, within SM_b21093 at 735.793 kb on - strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.835 kb on - strand, within SM_b21093 at 735.878 kb on + strand, within SM_b21093 at 735.878 kb on + strand, within SM_b21093 at 735.879 kb on - strand, within SM_b21093 at 736.099 kb on + strand, within SM_b21093 at 736.101 kb on + strand, within SM_b21093 at 736.101 kb on + strand, within SM_b21093 at 736.102 kb on - strand, within SM_b21093 at 736.102 kb on - strand, within SM_b21093
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 735,125 + SM_b21092 0.45 -0.5 735,170 + SM_b21092 0.54 +0.7 735,171 - SM_b21092 0.54 -0.2 735,305 + SM_b21092 0.82 +1.1 735,306 - SM_b21092 0.83 +1.4 735,323 - SM_b21092 0.86 +0.2 735,577 + SM_b21093 0.18 -0.5 735,639 + SM_b21093 0.25 -0.7 735,640 - SM_b21093 0.25 -0.1 735,640 - SM_b21093 0.25 -0.3 735,640 - SM_b21093 0.25 -0.2 735,702 + SM_b21093 0.32 -2.3 735,703 - SM_b21093 0.32 -0.3 735,703 - SM_b21093 0.32 +0.0 735,792 + SM_b21093 0.42 -0.2 735,792 + SM_b21093 0.42 -0.7 735,793 - SM_b21093 0.42 -0.2 735,834 + SM_b21093 0.47 -0.2 735,834 + SM_b21093 0.47 -1.9 735,834 + -0.2 735,834 + SM_b21093 0.47 +0.3 735,834 + SM_b21093 0.47 +0.5 735,834 + SM_b21093 0.47 -0.2 735,835 - SM_b21093 0.47 +0.3 735,878 + SM_b21093 0.51 -0.4 735,878 + SM_b21093 0.51 -0.7 735,879 - SM_b21093 0.52 -1.4 736,099 + SM_b21093 0.76 +0.1 736,101 + SM_b21093 0.76 +0.9 736,101 + SM_b21093 0.76 -0.2 736,102 - SM_b21093 0.76 -0.0 736,102 - SM_b21093 0.76 -0.1
Or see this region's nucleotide sequence