Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20616
Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,634,896 | - | SM_b20615 | 0.52 | +0.3 | |
1,634,897 | + | SM_b20615 | 0.52 | -0.7 | |
1,634,898 | - | SM_b20615 | 0.52 | -0.6 | |
1,634,994 | + | SM_b20615 | 0.57 | +1.0 | |
1,634,995 | - | SM_b20615 | 0.57 | +1.9 | |
1,635,012 | - | SM_b20615 | 0.58 | -0.3 | |
1,635,033 | + | SM_b20615 | 0.59 | +0.1 | |
1,635,033 | + | SM_b20615 | 0.59 | +0.3 | |
1,635,033 | + | SM_b20615 | 0.59 | +0.1 | |
1,635,194 | + | SM_b20615 | 0.68 | -0.6 | |
1,635,194 | + | SM_b20615 | 0.68 | +0.0 | |
1,635,195 | - | SM_b20615 | 0.68 | -0.1 | |
1,635,255 | + | SM_b20615 | 0.71 | -0.1 | |
1,635,257 | + | SM_b20615 | 0.72 | -0.5 | |
1,635,257 | + | SM_b20615 | 0.72 | -0.1 | |
1,635,360 | + | SM_b20615 | 0.77 | +1.1 | |
1,635,361 | - | SM_b20615 | 0.77 | +0.1 | |
1,635,735 | + | -0.3 | |||
1,635,735 | + | +0.3 | |||
1,635,735 | + | +0.2 | |||
1,635,736 | - | +0.3 | |||
1,635,857 | + | -0.3 | |||
1,635,858 | - | -1.0 | |||
1,635,858 | - | -0.7 | |||
1,636,429 | + | SM_b20616 | 0.66 | -0.8 | |
1,636,431 | + | SM_b20616 | 0.66 | -1.3 | |
1,636,749 | + | +0.6 | |||
1,636,919 | + | +0.4 | |||
1,636,967 | + | -2.2 | |||
1,636,967 | + | -0.9 | |||
1,637,743 | + | +0.1 |
Or see this region's nucleotide sequence