Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20360 and SM_b20361 are separated by 85 nucleotides SM_b20361 and SM_b20362 are separated by 90 nucleotides SM_b20362 and SM_b20363 are separated by 30 nucleotides
SM_b20360: SM_b20360 - hypothetical protein, at 370,827 to 371,558
_b20360
SM_b20361: SM_b20361 - ionic voltage-gated channel protein, at 371,644 to 372,441
_b20361
SM_b20362: SM_b20362 - inositol monophosphatase, at 372,532 to 373,332
_b20362
SM_b20363: SM_b20363 - iron ABC transporter ATP-binding protein, at 373,363 to 374,424
_b20363
Position (kb) 372
373
374 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 371.538 kb on - strand at 371.556 kb on + strand at 371.590 kb on + strand at 371.590 kb on + strand at 371.590 kb on + strand at 371.591 kb on - strand at 371.663 kb on - strand at 371.753 kb on + strand, within SM_b20361 at 371.753 kb on + strand, within SM_b20361 at 371.753 kb on + strand, within SM_b20361 at 371.794 kb on + strand, within SM_b20361 at 371.895 kb on - strand, within SM_b20361 at 371.895 kb on - strand, within SM_b20361 at 371.934 kb on - strand, within SM_b20361 at 371.948 kb on + strand, within SM_b20361 at 372.245 kb on + strand, within SM_b20361 at 372.261 kb on - strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.435 kb on + strand at 372.436 kb on - strand at 372.636 kb on - strand, within SM_b20362 at 372.695 kb on + strand, within SM_b20362 at 372.696 kb on - strand, within SM_b20362 at 372.704 kb on + strand, within SM_b20362 at 372.704 kb on + strand, within SM_b20362 at 372.704 kb on + strand, within SM_b20362 at 372.705 kb on - strand, within SM_b20362 at 372.707 kb on + strand, within SM_b20362 at 372.734 kb on + strand, within SM_b20362 at 372.734 kb on + strand, within SM_b20362 at 372.735 kb on - strand, within SM_b20362 at 372.735 kb on - strand, within SM_b20362 at 372.735 kb on - strand, within SM_b20362 at 372.744 kb on + strand, within SM_b20362 at 372.744 kb on + strand, within SM_b20362 at 372.744 kb on + strand, within SM_b20362 at 372.830 kb on + strand, within SM_b20362 at 372.830 kb on + strand, within SM_b20362 at 372.830 kb on + strand, within SM_b20362 at 372.830 kb on + strand, within SM_b20362 at 372.831 kb on - strand, within SM_b20362 at 372.831 kb on - strand, within SM_b20362 at 372.831 kb on - strand, within SM_b20362 at 373.101 kb on - strand, within SM_b20362 at 373.333 kb on - strand at 373.488 kb on - strand, within SM_b20363 at 373.509 kb on - strand, within SM_b20363 at 373.509 kb on - strand, within SM_b20363 at 373.844 kb on + strand, within SM_b20363 at 374.098 kb on - strand, within SM_b20363 at 374.117 kb on + strand, within SM_b20363 at 374.160 kb on - strand, within SM_b20363 at 374.205 kb on + strand, within SM_b20363 at 374.206 kb on - strand, within SM_b20363 at 374.206 kb on - strand, within SM_b20363 at 374.206 kb on - strand, within SM_b20363
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 371,538 - -0.2 371,556 + -1.1 371,590 + +0.6 371,590 + -0.1 371,590 + +0.7 371,591 - -0.6 371,663 - +0.9 371,753 + SM_b20361 0.14 -0.5 371,753 + SM_b20361 0.14 -0.1 371,753 + SM_b20361 0.14 +0.7 371,794 + SM_b20361 0.19 -0.3 371,895 - SM_b20361 0.31 -2.3 371,895 - SM_b20361 0.31 -0.8 371,934 - SM_b20361 0.36 -0.6 371,948 + SM_b20361 0.38 -0.1 372,245 + SM_b20361 0.75 -0.3 372,261 - SM_b20361 0.77 -0.3 372,319 + SM_b20361 0.85 -0.2 372,319 + SM_b20361 0.85 -0.1 372,319 + SM_b20361 0.85 -0.2 372,435 + +0.1 372,436 - -0.4 372,636 - SM_b20362 0.13 -1.1 372,695 + SM_b20362 0.20 -2.8 372,696 - SM_b20362 0.20 -0.4 372,704 + SM_b20362 0.21 -0.1 372,704 + SM_b20362 0.21 +0.5 372,704 + SM_b20362 0.21 -1.1 372,705 - SM_b20362 0.22 -1.2 372,707 + SM_b20362 0.22 +0.0 372,734 + SM_b20362 0.25 -1.1 372,734 + SM_b20362 0.25 +0.6 372,735 - SM_b20362 0.25 -0.8 372,735 - SM_b20362 0.25 -1.3 372,735 - SM_b20362 0.25 -1.4 372,744 + SM_b20362 0.26 -0.7 372,744 + SM_b20362 0.26 -0.5 372,744 + SM_b20362 0.26 +0.3 372,830 + SM_b20362 0.37 +0.5 372,830 + SM_b20362 0.37 +0.6 372,830 + SM_b20362 0.37 -0.2 372,830 + SM_b20362 0.37 +0.3 372,831 - SM_b20362 0.37 +0.2 372,831 - SM_b20362 0.37 +0.6 372,831 - SM_b20362 0.37 -0.1 373,101 - SM_b20362 0.71 +0.9 373,333 - -0.2 373,488 - SM_b20363 0.12 -0.1 373,509 - SM_b20363 0.14 +1.8 373,509 - SM_b20363 0.14 -0.1 373,844 + SM_b20363 0.45 -0.8 374,098 - SM_b20363 0.69 -0.2 374,117 + SM_b20363 0.71 -0.6 374,160 - SM_b20363 0.75 -1.1 374,205 + SM_b20363 0.79 -1.7 374,206 - SM_b20363 0.79 -0.0 374,206 - SM_b20363 0.79 -0.5 374,206 - SM_b20363 0.79 +0.1
Or see this region's nucleotide sequence