Strain Fitness in Sinorhizobium meliloti 1021 around SMc04448

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
1,359,390	-		SMc01813	0.14	-0.4
1,359,390	-		SMc01813	0.14	-0.8
1,359,391	+		SMc01813	0.14	-0.7
1,359,391	+		SMc01813	0.14	-0.0
1,359,391	+		SMc01813	0.14	-0.6
1,359,391	+		SMc01813	0.14	+0.4
1,359,394	+		SMc01813	0.14	+0.7
1,359,394	+		SMc01813	0.14	-0.4
1,359,394	+		SMc01813	0.14	-2.8
1,359,395	-		SMc01813	0.14	-0.5
1,359,395	-		SMc01813	0.14	-0.1
1,359,622	+		SMc01813	0.41	-0.3
1,360,148	-				+0.0
1,360,148	-				+0.2
1,360,148	-				-0.8
1,360,148	-				-0.4
1,360,151	-				+0.1
1,360,172	-				+1.0
1,360,172	-				-0.7
1,360,267	-				+0.2
1,360,267	-				-1.1
1,360,301	+				+0.3
1,360,301	+				+0.3
1,360,301	+				+1.0
1,360,301	+				+1.3
1,360,301	+				-0.7
1,360,302	-				+0.0
1,360,302	-				-1.3
1,360,302	-				+0.4
1,360,307	+				-0.0
1,360,308	-				-0.3
1,360,450	+		SMc04448	0.14	-0.2
1,360,517	+		SMc04448	0.18	-0.1
1,360,518	-		SMc04448	0.18	-0.5
1,360,518	-		SMc04448	0.18	-0.3
1,360,518	-		SMc04448	0.18	-0.4
1,360,518	-		SMc04448	0.18	+0.1
1,360,520	+		SMc04448	0.18	+1.3
1,360,520	+		SMc04448	0.18	+0.6
1,360,521	-		SMc04448	0.18	-0.5
1,360,521	-		SMc04448	0.18	-0.7
1,360,523	+		SMc04448	0.18	+1.7
1,360,524	-		SMc04448	0.18	-0.8
1,360,615	+		SMc04448	0.24	-0.7
1,360,615	+		SMc04448	0.24	+1.2
1,360,616	-		SMc04448	0.24	-0.2
1,360,836	-		SMc04448	0.38	+0.5
1,360,986	-		SMc04448	0.48	+0.9
1,360,986	-		SMc04448	0.48	+0.0
1,361,046	-		SMc04448	0.52	-0.2
1,361,316	+		SMc04448	0.69	+0.3
1,361,367	-		SMc04448	0.72	+0.6
1,361,376	-		SMc04448	0.73	+0.1
1,361,411	+		SMc04448	0.75	+0.6
1,361,452	+		SMc04448	0.78	+0.1
1,361,453	-		SMc04448	0.78	+0.7
1,361,453	-		SMc04448	0.78	+0.1
1,361,654	+				-0.2
1,361,654	+				-0.6
1,361,654	+				+0.6
1,361,654	+				+0.5
1,362,007	+				-1.3