Strain Fitness in Sinorhizobium meliloti 1021 around SMc04406

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
3,612,034	+		SMc04405	0.23	+0.1
3,612,205	+		SMc04405	0.38	+1.3
3,612,205	+		SMc04405	0.38	-0.6
3,612,206	-		SMc04405	0.38	-0.2
3,612,274	+		SMc04405	0.44	+0.3
3,612,275	-		SMc04405	0.44	+0.3
3,612,275	-		SMc04405	0.44	+0.3
3,612,283	+		SMc04405	0.45	+0.6
3,612,635	-		SMc04405	0.77	-0.8
3,612,915	-				-0.6
3,613,002	+				-0.1
3,613,003	-				-0.4
3,613,164	-		SMc04406	0.20	+0.7
3,613,195	-		SMc04406	0.24	-0.6
3,613,195	-		SMc04406	0.24	-0.6
3,613,195	-		SMc04406	0.24	-0.6
3,613,395	+		SMc04406	0.53	+1.1
3,613,729	-				+0.1
3,613,737	+				-1.5
3,613,932	-				+0.1
3,613,934	+				+0.0
3,613,934	+				-0.3
3,613,935	-				+0.2
3,613,935	-				-1.6
3,613,938	+				+0.7
3,614,007	+				-0.1
3,614,032	-		SMc04407	0.11	-0.9
3,614,032	-		SMc04407	0.11	+0.5
3,614,034	-		SMc04407	0.11	+0.3
3,614,034	-		SMc04407	0.11	-0.5
3,614,084	+		SMc04407	0.13	+0.9
3,614,085	-		SMc04407	0.13	-1.6
3,614,099	+		SMc04407	0.14	+0.7
3,614,099	+		SMc04407	0.14	-0.2
3,614,100	-		SMc04407	0.14	-0.4
3,614,100	-		SMc04407	0.14	-0.4
3,614,100	-		SMc04407	0.14	+0.2
3,614,100	-		SMc04407	0.14	+0.9
3,614,193	+		SMc04407	0.19	-0.6
3,614,195	+		SMc04407	0.19	+0.0
3,614,195	+		SMc04407	0.19	-2.0
3,614,195	+		SMc04407	0.19	-0.6
3,614,196	-		SMc04407	0.19	-0.6
3,614,196	-		SMc04407	0.19	-0.3
3,614,196	-		SMc04407	0.19	-1.5
3,614,196	-		SMc04407	0.19	-0.2
3,614,474	+		SMc04407	0.34	-0.1
3,614,475	-		SMc04407	0.34	-0.8
3,614,546	+		SMc04407	0.38	+0.0
3,614,546	+		SMc04407	0.38	+0.0
3,614,546	+		SMc04407	0.38	+0.4
3,614,634	+		SMc04407	0.42	-0.2
3,614,634	+		SMc04407	0.42	+0.1
3,614,634	+		SMc04407	0.42	-0.7
3,614,635	-		SMc04407	0.43	+0.4