Strain Fitness in Sinorhizobium meliloti 1021 around SMc04340

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
2,144,988	+				-0.3
2,144,988	+				+0.0
2,144,988	+				-1.1
2,145,045	-				+0.1
2,145,217	+		SMc04337	0.50	-0.3
2,145,217	+		SMc04337	0.50	+0.3
2,145,218	-		SMc04337	0.51	+0.3
2,145,218	-		SMc04337	0.51	+0.8
2,145,218	-		SMc04337	0.51	+0.0
2,145,422	+		SMc04339	0.11	+0.0
2,145,423	-		SMc04339	0.11	-0.1
2,145,424	+		SMc04339	0.11	+0.4
2,145,424	+		SMc04339	0.11	+0.6
2,145,424	+		SMc04339	0.11	+0.4
2,145,424	+		SMc04339	0.11	+0.7
2,145,425	-		SMc04339	0.11	-0.1
2,145,425	-		SMc04339	0.11	-0.1
2,145,425	-		SMc04339	0.11	-0.3
2,145,425	-		SMc04339	0.11	-0.6
2,145,467	+		SMc04339	0.18	+0.2
2,145,468	-		SMc04339	0.19	-0.2
2,145,518	+		SMc04339	0.27	+0.2
2,145,519	-		SMc04339	0.27	-0.2
2,145,519	-		SMc04339	0.27	-0.2
2,145,519	-		SMc04339	0.27	-0.7
2,145,519	-		SMc04339	0.27	-0.4
2,145,733	-		SMc04339	0.64	+0.1
2,146,466	+		SMc04340	0.48	-0.4
2,146,466	+		SMc04340	0.48	-0.2
2,146,466	+		SMc04340	0.48	+0.4
2,146,466	+		SMc04340	0.48	+0.3
2,146,466	+		SMc04340	0.48	-0.3
2,146,466	+		SMc04340	0.48	-0.3
2,146,467	-		SMc04340	0.48	-0.1
2,146,467	-		SMc04340	0.48	-0.4
2,146,601	-		SMc04340	0.60	+0.7
2,146,642	+		SMc04340	0.64	+1.1
2,146,642	+		SMc04340	0.64	-0.2
2,146,642	+		SMc04340	0.64	-0.6
2,146,642	+		SMc04340	0.64	+0.1
2,146,642	+		SMc04340	0.64	+0.2
2,146,642	+		SMc04340	0.64	+0.2
2,146,642	+		SMc04340	0.64	+0.1
2,146,642	+		SMc04340	0.64	-0.0
2,146,643	-		SMc04340	0.64	+0.2
2,146,643	-		SMc04340	0.64	+0.2
2,146,776	+		SMc04340	0.76	-0.7
2,146,776	+		SMc04340	0.76	+0.0
2,146,776	+		SMc04340	0.76	-0.4
2,146,777	-		SMc04340	0.76	-0.6
2,146,850	-		SMc04340	0.83	-0.7
2,146,864	+		SMc04340	0.84	+0.3
2,146,865	-		SMc04340	0.84	-0.3
2,146,865	-		SMc04340	0.84	-1.7
2,146,968	+				-0.4
2,147,058	+				-0.5
2,147,097	+				-2.2
2,147,116	+				-0.1
2,147,116	+				+0.2
2,147,117	-				-0.2
2,147,119	+				-0.4
2,147,119	+				-0.5
2,147,120	-				+0.3
2,147,120	-				-0.1
2,147,120	-				-0.2
2,147,120	-				+1.2
2,147,123	+				-0.1
2,147,123	+				+0.1
2,147,124	-				+0.2
2,147,124	-				+1.0
2,147,152	+				-0.7
2,147,153	-				-0.4
2,147,153	-				-0.1
2,147,153	-				-0.4
2,147,153	-				-0.4
2,147,153	-				-0.8
2,147,153	-				-0.4
2,147,153	-				-0.4
2,147,154	+				-0.3
2,147,154	+				-0.1
2,147,155	-				-0.0
2,147,253	+		SMc04342	0.10	-0.7
2,147,572	+		SMc04342	0.43	+1.0
2,147,572	+		SMc04342	0.43	+0.4
2,147,573	-		SMc04342	0.43	+0.1
2,147,573	-		SMc04342	0.43	-0.3
2,147,573	-		SMc04342	0.43	+2.8
2,147,998	+		SMc04342	0.88	+0.3
2,147,999	-		SMc04342	0.88	+0.0