Strain Fitness in Sinorhizobium meliloti 1021 around SMc04265
Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,094,484 | + | SMc04264 | 0.12 | -1.4 | |
2,094,604 | + | SMc04264 | 0.26 | +0.1 | |
2,094,875 | + | SMc04264 | 0.56 | -1.4 | |
2,095,136 | - | SMc04264 | 0.86 | -0.0 | |
2,095,320 | + | +0.1 | |||
2,095,370 | + | -0.7 | |||
2,095,370 | + | +0.4 | |||
2,095,370 | + | +0.4 | |||
2,095,371 | - | -0.1 | |||
2,095,371 | - | -0.1 | |||
2,095,373 | - | -0.7 | |||
2,095,456 | + | SMc04265 | 0.14 | -1.3 | |
2,095,456 | + | SMc04265 | 0.14 | -0.5 | |
2,095,457 | - | SMc04265 | 0.14 | -0.7 | |
2,095,457 | - | SMc04265 | 0.14 | +0.1 | |
2,095,457 | - | SMc04265 | 0.14 | -0.5 | |
2,095,822 | - | -0.9 | |||
2,095,837 | + | -0.2 | |||
2,095,838 | - | -0.3 | |||
2,095,850 | - | -0.4 | |||
2,095,856 | + | -0.1 | |||
2,095,857 | - | -0.4 | |||
2,095,857 | - | +0.1 | |||
2,096,030 | + | SMc04266 | 0.58 | -0.5 | |
2,096,031 | - | SMc04266 | 0.59 | -0.4 | |
2,096,095 | + | SMc04266 | 0.77 | -0.7 | |
2,096,096 | - | SMc04266 | 0.77 | +0.9 | |
2,096,096 | - | SMc04266 | 0.77 | -0.3 | |
2,096,148 | - | -0.1 | |||
2,096,181 | - | -0.2 |
Or see this region's nucleotide sequence