Strain Fitness in Sinorhizobium meliloti 1021 around SMc02119

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
1,589,839	+		SMc02120	0.18	-0.5
1,589,839	+		SMc02120	0.18	+0.6
1,589,840	-		SMc02120	0.19	-0.0
1,589,996	+		SMc02120	0.32	+0.9
1,589,996	+		SMc02120	0.32	-0.2
1,589,996	+		SMc02120	0.32	-0.9
1,589,996	+		SMc02120	0.32	-1.8
1,590,281	+		SMc02120	0.57	-0.3
1,590,281	+		SMc02120	0.57	-0.7
1,590,281	+		SMc02120	0.57	-0.8
1,590,282	-		SMc02120	0.57	-0.1
1,590,328	-		SMc02120	0.61	-0.1
1,590,368	+		SMc02120	0.64	+0.0
1,590,817	-				+0.7
1,590,817	-				-0.5
1,590,859	-				+0.9
1,590,859	-				-0.7
1,590,878	+				-0.3
1,590,942	+		SMc02119	0.13	+0.1
1,590,942	+		SMc02119	0.13	-0.3
1,591,152	+				+1.5
1,591,210	+		SMc02119	0.36	-0.3
1,591,210	+		SMc02119	0.36	+0.5
1,591,413	+		SMc02119	0.53	-0.9
1,591,413	+		SMc02119	0.53	-0.3
1,591,414	-		SMc02119	0.53	-0.3
1,591,414	-		SMc02119	0.53	-0.5
1,591,474	+		SMc02119	0.58	-0.9
1,591,474	+		SMc02119	0.58	-0.3
1,591,533	+		SMc02119	0.63	+0.2
1,591,544	+		SMc02119	0.64	+0.0
1,591,544	+		SMc02119	0.64	-0.2
1,591,545	-		SMc02119	0.64	-1.1
1,591,545	-		SMc02119	0.64	+0.3
1,591,545	-		SMc02119	0.64	+0.0
1,591,545	-		SMc02119	0.64	-0.3
1,591,545	-		SMc02119	0.64	-0.2
1,591,547	-		SMc02119	0.64	-1.0
1,591,547	-		SMc02119	0.64	-0.0
1,591,547	-		SMc02119	0.64	-0.0
1,591,643	-		SMc02119	0.72	-0.7
1,591,643	-		SMc02119	0.72	+0.3
1,591,693	+		SMc02119	0.76	-0.0
1,591,693	+		SMc02119	0.76	-0.0
1,591,694	-		SMc02119	0.76	-0.2
1,591,725	+		SMc02119	0.79	-0.3
1,591,725	+		SMc02119	0.79	-0.2
1,591,726	-		SMc02119	0.79	+0.4
1,591,787	-		SMc02119	0.84	-0.3
1,591,854	+		SMc02119	0.90	+0.3
1,591,854	+		SMc02119	0.90	-0.1
1,591,893	+				-0.2
1,591,893	+				-0.3
1,591,893	+				-0.2
1,591,893	+				+0.2
1,591,894	-				+0.1
1,591,894	-				+0.6
1,591,894	-				+0.9
1,592,033	+				-0.6
1,592,034	-				-1.0
1,592,034	-				+0.2
1,592,073	+				-0.2
1,592,073	+				-0.6
1,592,103	-				-1.1
1,592,372	+		SMc02118	0.28	-0.7
1,592,373	-		SMc02118	0.28	+0.3
1,592,504	+		SMc02118	0.41	-0.4
1,592,527	-		SMc02118	0.43	-2.4
1,592,527	-		SMc02118	0.43	+0.3
1,592,527	-		SMc02118	0.43	-1.3
1,592,528	+		SMc02118	0.43	-2.4
1,592,528	+		SMc02118	0.43	-0.8
1,592,528	+				-1.4
1,592,528	+		SMc02118	0.43	+0.2
1,592,529	-		SMc02118	0.43	-0.9
1,592,553	-		SMc02118	0.46	-0.7
1,592,597	+		SMc02118	0.50	-0.9
1,592,598	-		SMc02118	0.50	+1.2
1,592,621	+		SMc02118	0.52	-0.7
1,592,739	-		SMc02118	0.64	+0.0
1,592,739	-		SMc02118	0.64	+0.4
1,592,870	+		SMc02118	0.77	-1.1
1,592,870	+		SMc02118	0.77	+0.4
1,592,871	-		SMc02118	0.77	-1.1