Strain Fitness in Sinorhizobium meliloti 1021 around SMc02115
Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,595,891 | - | -2.1 | |||
1,595,968 | - | SMc02115 | 0.36 | -2.9 | |
1,596,138 | - | -1.3 | |||
1,596,138 | - | -0.1 | |||
1,596,138 | - | -0.3 | |||
1,596,138 | - | +0.6 | |||
1,596,138 | - | -0.6 | |||
1,596,138 | - | +1.1 | |||
1,596,140 | - | +0.1 | |||
1,596,187 | - | +0.0 | |||
1,596,187 | - | +0.5 | |||
1,596,187 | - | -0.6 | |||
1,596,269 | + | -0.2 | |||
1,596,277 | - | +0.8 | |||
1,596,300 | - | -0.9 | |||
1,596,300 | - | -1.7 | |||
1,596,300 | - | -0.3 | |||
1,596,555 | - | SMc02114 | 0.31 | -1.0 | |
1,596,555 | - | SMc02114 | 0.31 | -1.4 | |
1,596,718 | - | SMc02114 | 0.52 | -0.5 | |
1,596,867 | + | SMc02114 | 0.71 | -1.0 | |
1,596,867 | + | SMc02114 | 0.71 | -0.6 | |
1,596,868 | - | SMc02114 | 0.71 | -0.5 | |
1,596,904 | - | SMc02114 | 0.76 | -0.4 | |
1,596,913 | - | SMc02114 | 0.77 | -1.1 |
Or see this region's nucleotide sequence