Strain Fitness in Sinorhizobium meliloti 1021 around SMc00262

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
1,829,469	+		SMc00261	0.41	-0.5
1,829,523	+		SMc00261	0.45	-0.4
1,829,523	+		SMc00261	0.45	+0.9
1,829,541	+		SMc00261	0.46	+0.7
1,829,541	+		SMc00261	0.46	-0.0
1,829,541	+		SMc00261	0.46	-1.0
1,829,542	-		SMc00261	0.46	-0.1
1,829,542	-		SMc00261	0.46	-0.2
1,829,550	+		SMc00261	0.46	+0.2
1,829,551	-		SMc00261	0.46	+0.0
1,829,572	-		SMc00261	0.48	-0.2
1,829,606	+		SMc00261	0.50	+0.1
1,829,606	+		SMc00261	0.50	-0.1
1,829,606	+		SMc00261	0.50	-0.2
1,829,607	-		SMc00261	0.50	-0.1
1,829,611	+		SMc00261	0.50	-0.1
1,829,654	+		SMc00261	0.53	-0.3
1,829,655	-		SMc00261	0.53	+0.5
1,829,890	+		SMc00261	0.67	+0.5
1,829,891	-		SMc00261	0.67	-0.7
1,829,892	+		SMc00261	0.67	-0.7
1,829,893	-		SMc00261	0.67	+1.6
1,829,893	-		SMc00261	0.67	+0.1
1,829,893	-		SMc00261	0.67	-2.6
1,829,898	+		SMc00261	0.67	-0.2
1,829,899	-		SMc00261	0.67	+0.4
1,830,074	+		SMc00261	0.78	-0.2
1,830,075	-		SMc00261	0.78	+0.8
1,830,108	+		SMc00261	0.80	+0.0
1,830,109	-				+0.6
1,830,113	+		SMc00261	0.80	-0.0
1,830,114	-		SMc00261	0.80	-0.4
1,830,236	-		SMc00261	0.88	-0.1
1,830,265	-		SMc00261	0.90	-0.7
1,830,265	-		SMc00261	0.90	-0.4
1,830,461	+				+0.5
1,830,461	+				+0.1
1,830,461	+				+0.9
1,830,462	-				-0.8
1,830,462	-				-1.6
1,830,462	-				+0.5
1,830,543	+				-0.9
1,830,677	+		SMc00262	0.21	+0.2
1,830,678	-		SMc00262	0.21	+0.2
1,830,713	+		SMc00262	0.24	+2.2
1,830,730	+		SMc00262	0.25	-0.6
1,830,731	-		SMc00262	0.25	-0.9
1,830,958	+		SMc00262	0.45	-0.8
1,830,958	+		SMc00262	0.45	-0.1
1,831,053	+		SMc00262	0.53	-0.4
1,831,073	-		SMc00262	0.55	+0.1
1,831,142	+		SMc00262	0.61	-0.5
1,831,142	+		SMc00262	0.61	+1.2
1,831,142	+		SMc00262	0.61	-0.3
1,831,142	+		SMc00262	0.61	-0.1
1,831,142	+		SMc00262	0.61	+0.3
1,831,142	+		SMc00262	0.61	-0.3
1,831,142	+		SMc00262	0.61	-0.5
1,831,143	-		SMc00262	0.61	+0.0
1,831,143	-		SMc00262	0.61	+0.0
1,831,143	-		SMc00262	0.61	+0.1
1,831,143	-		SMc00262	0.61	-0.6
1,831,143	-		SMc00262	0.61	-0.7
1,831,209	-		SMc00262	0.66	-0.5
1,831,209	-		SMc00262	0.66	-0.0
1,831,323	+		SMc00262	0.76	+0.1
1,831,324	-		SMc00262	0.76	+0.4
1,831,325	+		SMc00262	0.76	+0.0
1,831,325	+		SMc00262	0.76	-0.4
1,831,326	-		SMc00262	0.76	+0.5
1,831,582	+				-0.5
1,831,583	-				-0.3
1,831,583	-				-0.9
1,831,641	+				+0.9
1,831,641	+				-0.6
1,831,641	+				+0.2
1,831,641	+				+0.3
1,831,642	-				+0.4
1,831,642	-				-0.2
1,831,642	-				-0.5
1,831,642	-				-2.0
1,831,642	-				-0.1
1,831,842	-		SMc00263	0.29	-1.0
1,832,218	+		SMc00263	0.73	-0.0
1,832,218	+		SMc00263	0.73	-0.0
1,832,219	-		SMc00263	0.73	-0.3
1,832,235	-		SMc00263	0.75	-0.1
1,832,236	+		SMc00263	0.75	+0.3
1,832,236	+		SMc00263	0.75	-0.5
1,832,237	-		SMc00263	0.75	+0.6
1,832,237	-		SMc00263	0.75	+0.5
1,832,237	-		SMc00263	0.75	+0.3
1,832,237	-		SMc00263	0.75	-2.0
1,832,240	-		SMc00263	0.76	+0.2
1,832,309	+		SMc00263	0.84	-0.3
1,832,457	+				+1.0
1,832,457	+				-1.2
1,832,458	-				+0.3