Strain Fitness in Sinorhizobium meliloti 1021 around SMc00077
Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,008,254 | + | SMc00451 | 0.41 | -3.1 | |
1,008,254 | + | SMc00451 | 0.41 | +0.3 | |
1,008,255 | - | SMc00451 | 0.41 | +0.3 | |
1,008,477 | + | SMc00451 | 0.58 | -0.1 | |
1,008,478 | - | SMc00451 | 0.58 | +0.0 | |
1,008,478 | - | SMc00451 | 0.58 | +0.3 | |
1,008,480 | - | SMc00451 | 0.59 | +0.1 | |
1,008,480 | - | SMc00451 | 0.59 | +0.1 | |
1,008,576 | - | SMc00451 | 0.66 | +0.8 | |
1,008,755 | + | SMc00451 | 0.80 | +0.1 | |
1,008,758 | + | SMc00451 | 0.80 | -0.3 | |
1,008,758 | + | SMc00451 | 0.80 | -0.0 | |
1,008,758 | + | SMc00451 | 0.80 | +0.1 | |
1,008,759 | - | SMc00451 | 0.80 | +0.1 | |
1,009,054 | - | +2.2 | |||
1,010,610 | + | -0.7 | |||
1,010,610 | + | -0.3 | |||
1,011,316 | + | -0.9 | |||
1,011,328 | + | -0.1 | |||
1,011,329 | - | -0.7 |
Or see this region's nucleotide sequence