Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21175 and SM_b21176 are separated by 171 nucleotides SM_b21176 and SM_b21177 are separated by 91 nucleotides
SM_b21175: SM_b21175 - phosphate uptake ABC transporter permease, at 921,140 to 922,102
_b21175
SM_b21176: SM_b21176 - phosphate uptake ABC transporter substrate-binding protein precursor, at 922,274 to 923,179
_b21176
SM_b21177: SM_b21177 - phosphate uptake ABC transporter ATP-binding protein, at 923,271 to 924,110
_b21177
Position (kb) 922
923
924 Strain fitness (log2 ratio) -1
0
1
2
3 at 921.366 kb on + strand, within SM_b21175 at 921.756 kb on + strand, within SM_b21175 at 921.786 kb on + strand, within SM_b21175 at 921.811 kb on - strand, within SM_b21175 at 922.011 kb on + strand at 922.085 kb on - strand at 922.476 kb on - strand, within SM_b21176 at 922.796 kb on - strand, within SM_b21176 at 922.899 kb on + strand, within SM_b21176 at 922.899 kb on + strand, within SM_b21176 at 922.899 kb on + strand, within SM_b21176 at 922.900 kb on - strand, within SM_b21176 at 922.978 kb on - strand, within SM_b21176 at 923.173 kb on + strand at 923.390 kb on - strand, within SM_b21177 at 923.390 kb on - strand, within SM_b21177 at 923.479 kb on + strand, within SM_b21177 at 923.479 kb on + strand, within SM_b21177 at 923.480 kb on - strand, within SM_b21177 at 923.501 kb on + strand, within SM_b21177 at 923.502 kb on - strand, within SM_b21177 at 923.781 kb on + strand, within SM_b21177 at 923.922 kb on + strand, within SM_b21177 at 923.923 kb on - strand, within SM_b21177 at 923.971 kb on - strand, within SM_b21177 at 924.014 kb on + strand, within SM_b21177 at 924.014 kb on + strand, within SM_b21177 at 924.040 kb on - strand at 924.091 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.02 mg/ml remove 921,366 + SM_b21175 0.23 +1.0 921,756 + SM_b21175 0.64 +0.3 921,786 + SM_b21175 0.67 -0.0 921,811 - SM_b21175 0.70 +0.4 922,011 + +0.5 922,085 - -0.3 922,476 - SM_b21176 0.22 +1.3 922,796 - SM_b21176 0.58 +1.3 922,899 + SM_b21176 0.69 -0.5 922,899 + SM_b21176 0.69 +0.6 922,899 + SM_b21176 0.69 +0.6 922,900 - SM_b21176 0.69 +0.6 922,978 - SM_b21176 0.78 -0.7 923,173 + -0.1 923,390 - SM_b21177 0.14 +1.9 923,390 - SM_b21177 0.14 +0.5 923,479 + SM_b21177 0.25 +0.3 923,479 + SM_b21177 0.25 +0.7 923,480 - SM_b21177 0.25 +0.1 923,501 + SM_b21177 0.27 +3.0 923,502 - SM_b21177 0.28 +0.3 923,781 + SM_b21177 0.61 -0.1 923,922 + SM_b21177 0.78 +1.6 923,923 - SM_b21177 0.78 -0.4 923,971 - SM_b21177 0.83 +0.8 924,014 + SM_b21177 0.88 +0.5 924,014 + SM_b21177 0.88 +0.2 924,040 - +0.4 924,091 - +0.7
Or see this region's nucleotide sequence