Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20805 and SM_b20806 are separated by 127 nucleotides SM_b20806 and SM_b20807 are separated by 132 nucleotides
SM_b20805: SM_b20805 - glycosyltransferase, at 590,027 to 590,932
_b20805
SM_b20806: SM_b20806 - hypothetical protein, at 591,060 to 591,749
_b20806
SM_b20807: SM_b20807 - hypothetical protein, at 591,882 to 593,519
_b20807
Position (kb) 591
592 Strain fitness (log2 ratio) -2
-1
0
1 at 590.082 kb on + strand at 590.083 kb on - strand at 590.242 kb on + strand, within SM_b20805 at 590.365 kb on - strand, within SM_b20805 at 590.388 kb on + strand, within SM_b20805 at 590.388 kb on + strand, within SM_b20805 at 590.431 kb on + strand, within SM_b20805 at 590.432 kb on - strand, within SM_b20805 at 590.432 kb on - strand, within SM_b20805 at 590.432 kb on - strand, within SM_b20805 at 590.457 kb on + strand, within SM_b20805 at 590.458 kb on - strand, within SM_b20805 at 590.508 kb on + strand, within SM_b20805 at 590.534 kb on + strand, within SM_b20805 at 590.579 kb on + strand, within SM_b20805 at 590.747 kb on + strand, within SM_b20805 at 590.751 kb on - strand, within SM_b20805 at 590.751 kb on - strand, within SM_b20805 at 590.751 kb on - strand, within SM_b20805 at 590.765 kb on - strand, within SM_b20805 at 590.765 kb on - strand, within SM_b20805 at 590.830 kb on + strand, within SM_b20805 at 590.831 kb on - strand, within SM_b20805 at 590.833 kb on - strand, within SM_b20805 at 590.904 kb on - strand at 590.953 kb on + strand at 590.963 kb on + strand at 590.963 kb on + strand at 590.964 kb on - strand at 591.011 kb on + strand at 591.012 kb on - strand at 591.078 kb on + strand at 591.079 kb on - strand at 591.079 kb on - strand at 591.134 kb on + strand, within SM_b20806 at 591.148 kb on + strand, within SM_b20806 at 591.199 kb on + strand, within SM_b20806 at 591.207 kb on + strand, within SM_b20806 at 591.258 kb on + strand, within SM_b20806 at 591.540 kb on + strand, within SM_b20806 at 591.540 kb on + strand, within SM_b20806 at 591.541 kb on - strand, within SM_b20806 at 591.544 kb on + strand, within SM_b20806 at 591.634 kb on - strand, within SM_b20806 at 591.647 kb on + strand, within SM_b20806 at 591.727 kb on + strand at 591.728 kb on - strand at 591.731 kb on + strand at 591.804 kb on + strand at 591.967 kb on + strand at 591.967 kb on + strand at 591.967 kb on + strand at 591.967 kb on + strand at 591.967 kb on + strand at 592.062 kb on + strand, within SM_b20807 at 592.062 kb on + strand, within SM_b20807 at 592.070 kb on - strand, within SM_b20807 at 592.070 kb on - strand, within SM_b20807 at 592.070 kb on - strand, within SM_b20807 at 592.164 kb on + strand, within SM_b20807 at 592.164 kb on + strand, within SM_b20807 at 592.164 kb on + strand, within SM_b20807 at 592.165 kb on - strand, within SM_b20807 at 592.200 kb on + strand, within SM_b20807 at 592.232 kb on - strand, within SM_b20807 at 592.238 kb on + strand, within SM_b20807 at 592.406 kb on - strand, within SM_b20807 at 592.494 kb on + strand, within SM_b20807 at 592.494 kb on + strand, within SM_b20807 at 592.495 kb on - strand, within SM_b20807 at 592.539 kb on + strand, within SM_b20807 at 592.539 kb on + strand, within SM_b20807 at 592.540 kb on - strand, within SM_b20807 at 592.551 kb on - strand, within SM_b20807 at 592.605 kb on + strand, within SM_b20807 at 592.606 kb on - strand, within SM_b20807 at 592.606 kb on - strand, within SM_b20807 at 592.671 kb on + strand, within SM_b20807 at 592.685 kb on + strand, within SM_b20807 at 592.686 kb on - strand, within SM_b20807 at 592.740 kb on - strand, within SM_b20807
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.02 mg/ml remove 590,082 + +1.0 590,083 - -0.7 590,242 + SM_b20805 0.24 -0.5 590,365 - SM_b20805 0.37 -0.3 590,388 + SM_b20805 0.40 -0.4 590,388 + SM_b20805 0.40 +0.2 590,431 + SM_b20805 0.45 -0.7 590,432 - SM_b20805 0.45 -0.2 590,432 - SM_b20805 0.45 +0.0 590,432 - SM_b20805 0.45 -0.2 590,457 + SM_b20805 0.47 -0.9 590,458 - SM_b20805 0.48 +0.1 590,508 + SM_b20805 0.53 +0.0 590,534 + SM_b20805 0.56 -0.8 590,579 + SM_b20805 0.61 +0.1 590,747 + SM_b20805 0.79 -1.9 590,751 - SM_b20805 0.80 -0.4 590,751 - SM_b20805 0.80 -2.6 590,751 - SM_b20805 0.80 -0.7 590,765 - SM_b20805 0.81 -0.4 590,765 - SM_b20805 0.81 -1.6 590,830 + SM_b20805 0.89 -1.0 590,831 - SM_b20805 0.89 +0.3 590,833 - SM_b20805 0.89 -0.9 590,904 - -0.2 590,953 + +0.1 590,963 + +0.5 590,963 + +0.6 590,964 - +0.2 591,011 + -0.2 591,012 - -0.2 591,078 + -0.2 591,079 - -1.6 591,079 - +1.3 591,134 + SM_b20806 0.11 +0.3 591,148 + SM_b20806 0.13 -0.4 591,199 + SM_b20806 0.20 -0.8 591,207 + SM_b20806 0.21 -0.7 591,258 + SM_b20806 0.29 -0.7 591,540 + SM_b20806 0.70 -1.7 591,540 + SM_b20806 0.70 -1.8 591,541 - SM_b20806 0.70 -0.3 591,544 + SM_b20806 0.70 +1.0 591,634 - SM_b20806 0.83 -1.0 591,647 + SM_b20806 0.85 -0.2 591,727 + -0.5 591,728 - +0.3 591,731 + +0.2 591,804 + +0.3 591,967 + +0.2 591,967 + +1.1 591,967 + -0.1 591,967 + +0.3 591,967 + +0.0 592,062 + SM_b20807 0.11 -0.2 592,062 + SM_b20807 0.11 +0.0 592,070 - SM_b20807 0.11 +0.5 592,070 - SM_b20807 0.11 +0.2 592,070 - SM_b20807 0.11 +0.2 592,164 + SM_b20807 0.17 +1.5 592,164 + SM_b20807 0.17 -0.8 592,164 + SM_b20807 0.17 +0.4 592,165 - SM_b20807 0.17 -0.7 592,200 + SM_b20807 0.19 -0.4 592,232 - SM_b20807 0.21 +0.0 592,238 + SM_b20807 0.22 -0.6 592,406 - SM_b20807 0.32 -0.5 592,494 + SM_b20807 0.37 -0.1 592,494 + SM_b20807 0.37 -0.3 592,495 - SM_b20807 0.37 -1.0 592,539 + SM_b20807 0.40 -0.2 592,539 + SM_b20807 0.40 +0.1 592,540 - SM_b20807 0.40 +0.3 592,551 - SM_b20807 0.41 -0.3 592,605 + SM_b20807 0.44 -0.5 592,606 - SM_b20807 0.44 -0.4 592,606 - SM_b20807 0.44 +0.5 592,671 + SM_b20807 0.48 -0.1 592,685 + SM_b20807 0.49 +0.9 592,686 - SM_b20807 0.49 -0.1 592,740 - SM_b20807 0.52 +0.3
Or see this region's nucleotide sequence