Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS21320 and ABZR87_RS21325 are separated by 110 nucleotides ABZR87_RS21325 and ABZR87_RS21330 are separated by 67 nucleotides
ABZR87_RS21320: ABZR87_RS21320 - putative zinc-binding metallopeptidase, at 1,164,939 to 1,166,063
_RS21320
ABZR87_RS21325: ABZR87_RS21325 - hypothetical protein, at 1,166,174 to 1,166,686
_RS21325
ABZR87_RS21330: ABZR87_RS21330 - chemotaxis protein, at 1,166,754 to 1,167,707
_RS21330
Position (kb)
1166
1167 Strain fitness (log2 ratio)
-1
0
1 at 1165.185 kb on + strand, within ABZR87_RS21320 at 1165.185 kb on + strand, within ABZR87_RS21320 at 1165.186 kb on - strand, within ABZR87_RS21320 at 1165.186 kb on - strand, within ABZR87_RS21320 at 1165.186 kb on - strand, within ABZR87_RS21320 at 1165.186 kb on - strand, within ABZR87_RS21320 at 1165.302 kb on + strand, within ABZR87_RS21320 at 1165.302 kb on + strand, within ABZR87_RS21320 at 1165.302 kb on + strand, within ABZR87_RS21320 at 1165.302 kb on + strand, within ABZR87_RS21320 at 1165.302 kb on + strand, within ABZR87_RS21320 at 1165.302 kb on + strand, within ABZR87_RS21320 at 1165.303 kb on - strand, within ABZR87_RS21320 at 1165.303 kb on - strand, within ABZR87_RS21320 at 1165.303 kb on - strand, within ABZR87_RS21320 at 1165.308 kb on + strand, within ABZR87_RS21320 at 1165.308 kb on + strand, within ABZR87_RS21320 at 1165.308 kb on + strand, within ABZR87_RS21320 at 1165.309 kb on - strand, within ABZR87_RS21320 at 1165.309 kb on - strand, within ABZR87_RS21320 at 1165.309 kb on - strand, within ABZR87_RS21320 at 1165.309 kb on - strand, within ABZR87_RS21320 at 1165.341 kb on + strand, within ABZR87_RS21320 at 1165.341 kb on + strand, within ABZR87_RS21320 at 1165.341 kb on + strand, within ABZR87_RS21320 at 1165.342 kb on - strand, within ABZR87_RS21320 at 1165.342 kb on - strand, within ABZR87_RS21320 at 1165.343 kb on + strand, within ABZR87_RS21320 at 1165.343 kb on + strand, within ABZR87_RS21320 at 1165.343 kb on + strand, within ABZR87_RS21320 at 1165.343 kb on + strand, within ABZR87_RS21320 at 1165.343 kb on + strand, within ABZR87_RS21320 at 1165.344 kb on - strand, within ABZR87_RS21320 at 1165.539 kb on + strand, within ABZR87_RS21320 at 1165.540 kb on - strand, within ABZR87_RS21320 at 1165.582 kb on - strand, within ABZR87_RS21320 at 1165.663 kb on - strand, within ABZR87_RS21320 at 1165.683 kb on + strand, within ABZR87_RS21320 at 1165.684 kb on - strand, within ABZR87_RS21320 at 1165.684 kb on - strand, within ABZR87_RS21320 at 1165.684 kb on - strand, within ABZR87_RS21320 at 1165.684 kb on - strand, within ABZR87_RS21320 at 1165.686 kb on + strand, within ABZR87_RS21320 at 1165.686 kb on + strand, within ABZR87_RS21320 at 1165.687 kb on - strand, within ABZR87_RS21320 at 1165.687 kb on - strand, within ABZR87_RS21320 at 1165.722 kb on + strand, within ABZR87_RS21320 at 1165.722 kb on + strand, within ABZR87_RS21320 at 1165.722 kb on + strand, within ABZR87_RS21320 at 1165.722 kb on + strand, within ABZR87_RS21320 at 1165.723 kb on - strand, within ABZR87_RS21320 at 1165.723 kb on - strand, within ABZR87_RS21320 at 1165.723 kb on - strand, within ABZR87_RS21320 at 1165.723 kb on - strand, within ABZR87_RS21320 at 1165.723 kb on - strand, within ABZR87_RS21320 at 1165.783 kb on - strand, within ABZR87_RS21320 at 1165.821 kb on + strand, within ABZR87_RS21320 at 1165.821 kb on + strand, within ABZR87_RS21320 at 1165.822 kb on - strand, within ABZR87_RS21320 at 1165.822 kb on - strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.932 kb on + strand, within ABZR87_RS21320 at 1165.933 kb on - strand, within ABZR87_RS21320 at 1165.933 kb on - strand, within ABZR87_RS21320 at 1165.933 kb on - strand, within ABZR87_RS21320 at 1165.933 kb on - strand, within ABZR87_RS21320 at 1165.933 kb on - strand, within ABZR87_RS21320 at 1165.933 kb on - strand, within ABZR87_RS21320 at 1165.977 kb on + strand at 1166.111 kb on + strand at 1166.111 kb on + strand at 1166.112 kb on - strand at 1166.134 kb on - strand at 1166.296 kb on + strand, within ABZR87_RS21325 at 1166.321 kb on + strand, within ABZR87_RS21325 at 1166.321 kb on + strand, within ABZR87_RS21325 at 1166.321 kb on + strand, within ABZR87_RS21325 at 1166.322 kb on - strand, within ABZR87_RS21325 at 1166.322 kb on - strand, within ABZR87_RS21325 at 1166.322 kb on - strand, within ABZR87_RS21325 at 1166.322 kb on - strand, within ABZR87_RS21325 at 1166.354 kb on + strand, within ABZR87_RS21325 at 1166.384 kb on + strand, within ABZR87_RS21325 at 1166.384 kb on + strand, within ABZR87_RS21325 at 1166.384 kb on + strand, within ABZR87_RS21325 at 1166.385 kb on - strand, within ABZR87_RS21325 at 1166.385 kb on - strand, within ABZR87_RS21325 at 1166.453 kb on + strand, within ABZR87_RS21325 at 1166.453 kb on + strand, within ABZR87_RS21325 at 1166.453 kb on + strand, within ABZR87_RS21325 at 1166.454 kb on - strand, within ABZR87_RS21325 at 1166.528 kb on + strand, within ABZR87_RS21325 at 1166.529 kb on - strand, within ABZR87_RS21325 at 1166.561 kb on + strand, within ABZR87_RS21325 at 1166.570 kb on + strand, within ABZR87_RS21325 at 1166.570 kb on + strand, within ABZR87_RS21325 at 1166.570 kb on + strand, within ABZR87_RS21325 at 1166.570 kb on + strand, within ABZR87_RS21325 at 1166.570 kb on + strand, within ABZR87_RS21325 at 1166.570 kb on + strand, within ABZR87_RS21325 at 1166.570 kb on + strand, within ABZR87_RS21325 at 1166.571 kb on - strand, within ABZR87_RS21325 at 1166.571 kb on - strand, within ABZR87_RS21325 at 1166.571 kb on - strand, within ABZR87_RS21325 at 1166.571 kb on - strand, within ABZR87_RS21325 at 1166.571 kb on - strand, within ABZR87_RS21325 at 1166.571 kb on - strand, within ABZR87_RS21325 at 1166.571 kb on - strand, within ABZR87_RS21325 at 1166.684 kb on + strand at 1166.684 kb on + strand at 1166.684 kb on + strand at 1166.749 kb on + strand at 1166.749 kb on + strand at 1166.749 kb on + strand at 1166.750 kb on - strand at 1167.070 kb on + strand, within ABZR87_RS21330 at 1167.070 kb on + strand, within ABZR87_RS21330 at 1167.071 kb on - strand, within ABZR87_RS21330 at 1167.071 kb on - strand, within ABZR87_RS21330 at 1167.071 kb on - strand, within ABZR87_RS21330 at 1167.302 kb on + strand, within ABZR87_RS21330 at 1167.303 kb on - strand, within ABZR87_RS21330 at 1167.303 kb on - strand, within ABZR87_RS21330 at 1167.406 kb on + strand, within ABZR87_RS21330 at 1167.406 kb on + strand, within ABZR87_RS21330 at 1167.512 kb on + strand, within ABZR87_RS21330 at 1167.581 kb on + strand, within ABZR87_RS21330 at 1167.582 kb on - strand, within ABZR87_RS21330
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,165,185 + ABZR87_RS21320 0.22 +0.3 1,165,185 + ABZR87_RS21320 0.22 +0.4 1,165,186 - ABZR87_RS21320 0.22 +0.4 1,165,186 - ABZR87_RS21320 0.22 -0.6 1,165,186 - ABZR87_RS21320 0.22 -0.2 1,165,186 - ABZR87_RS21320 0.22 -0.2 1,165,302 + ABZR87_RS21320 0.32 -0.8 1,165,302 + ABZR87_RS21320 0.32 -0.7 1,165,302 + ABZR87_RS21320 0.32 +0.0 1,165,302 + ABZR87_RS21320 0.32 +1.2 1,165,302 + ABZR87_RS21320 0.32 -0.1 1,165,302 + ABZR87_RS21320 0.32 +0.3 1,165,303 - ABZR87_RS21320 0.32 +0.0 1,165,303 - ABZR87_RS21320 0.32 -0.6 1,165,303 - ABZR87_RS21320 0.32 +0.1 1,165,308 + ABZR87_RS21320 0.33 -0.1 1,165,308 + ABZR87_RS21320 0.33 -1.4 1,165,308 + ABZR87_RS21320 0.33 +0.1 1,165,309 - ABZR87_RS21320 0.33 +0.4 1,165,309 - ABZR87_RS21320 0.33 -1.0 1,165,309 - ABZR87_RS21320 0.33 -0.8 1,165,309 - ABZR87_RS21320 0.33 -0.2 1,165,341 + ABZR87_RS21320 0.36 +0.8 1,165,341 + ABZR87_RS21320 0.36 -0.2 1,165,341 + ABZR87_RS21320 0.36 +0.1 1,165,342 - ABZR87_RS21320 0.36 -0.7 1,165,342 - ABZR87_RS21320 0.36 -0.6 1,165,343 + ABZR87_RS21320 0.36 +0.9 1,165,343 + ABZR87_RS21320 0.36 -0.3 1,165,343 + ABZR87_RS21320 0.36 +0.2 1,165,343 + ABZR87_RS21320 0.36 +0.1 1,165,343 + ABZR87_RS21320 0.36 +0.1 1,165,344 - ABZR87_RS21320 0.36 +0.6 1,165,539 + ABZR87_RS21320 0.53 -0.3 1,165,540 - ABZR87_RS21320 0.53 -0.1 1,165,582 - ABZR87_RS21320 0.57 -0.1 1,165,663 - ABZR87_RS21320 0.64 -0.2 1,165,683 + ABZR87_RS21320 0.66 -0.2 1,165,684 - ABZR87_RS21320 0.66 +0.3 1,165,684 - ABZR87_RS21320 0.66 +0.7 1,165,684 - ABZR87_RS21320 0.66 +0.5 1,165,684 - ABZR87_RS21320 0.66 +0.4 1,165,686 + ABZR87_RS21320 0.66 -0.3 1,165,686 + ABZR87_RS21320 0.66 +0.5 1,165,687 - ABZR87_RS21320 0.66 +0.3 1,165,687 - ABZR87_RS21320 0.66 +0.1 1,165,722 + ABZR87_RS21320 0.70 +0.3 1,165,722 + ABZR87_RS21320 0.70 -0.0 1,165,722 + ABZR87_RS21320 0.70 -0.4 1,165,722 + ABZR87_RS21320 0.70 +1.0 1,165,723 - ABZR87_RS21320 0.70 +0.4 1,165,723 - ABZR87_RS21320 0.70 +0.3 1,165,723 - ABZR87_RS21320 0.70 -0.3 1,165,723 - ABZR87_RS21320 0.70 +0.0 1,165,723 - ABZR87_RS21320 0.70 -0.2 1,165,783 - ABZR87_RS21320 0.75 -0.6 1,165,821 + ABZR87_RS21320 0.78 +0.3 1,165,821 + ABZR87_RS21320 0.78 -0.4 1,165,822 - ABZR87_RS21320 0.78 -0.1 1,165,822 - ABZR87_RS21320 0.78 +0.7 1,165,932 + ABZR87_RS21320 0.88 -0.8 1,165,932 + ABZR87_RS21320 0.88 -0.1 1,165,932 + ABZR87_RS21320 0.88 +0.1 1,165,932 + ABZR87_RS21320 0.88 -0.3 1,165,932 + ABZR87_RS21320 0.88 -0.6 1,165,932 + ABZR87_RS21320 0.88 +1.2 1,165,932 + ABZR87_RS21320 0.88 +0.1 1,165,932 + ABZR87_RS21320 0.88 -0.6 1,165,932 + ABZR87_RS21320 0.88 +0.1 1,165,932 + ABZR87_RS21320 0.88 +0.1 1,165,932 + ABZR87_RS21320 0.88 -0.3 1,165,933 - ABZR87_RS21320 0.88 +0.0 1,165,933 - ABZR87_RS21320 0.88 -0.3 1,165,933 - ABZR87_RS21320 0.88 -0.2 1,165,933 - ABZR87_RS21320 0.88 +0.6 1,165,933 - ABZR87_RS21320 0.88 +0.7 1,165,933 - ABZR87_RS21320 0.88 +0.7 1,165,977 + -0.2 1,166,111 + -0.1 1,166,111 + -0.2 1,166,112 - -0.1 1,166,134 - -0.1 1,166,296 + ABZR87_RS21325 0.24 -1.4 1,166,321 + ABZR87_RS21325 0.29 +0.4 1,166,321 + ABZR87_RS21325 0.29 +0.7 1,166,321 + ABZR87_RS21325 0.29 +0.2 1,166,322 - ABZR87_RS21325 0.29 -0.8 1,166,322 - ABZR87_RS21325 0.29 -1.0 1,166,322 - ABZR87_RS21325 0.29 +0.1 1,166,322 - ABZR87_RS21325 0.29 -1.1 1,166,354 + ABZR87_RS21325 0.35 +0.1 1,166,384 + ABZR87_RS21325 0.41 +0.6 1,166,384 + ABZR87_RS21325 0.41 +0.2 1,166,384 + ABZR87_RS21325 0.41 +0.8 1,166,385 - ABZR87_RS21325 0.41 +0.3 1,166,385 - ABZR87_RS21325 0.41 +0.2 1,166,453 + ABZR87_RS21325 0.54 +0.2 1,166,453 + ABZR87_RS21325 0.54 -0.1 1,166,453 + ABZR87_RS21325 0.54 +0.3 1,166,454 - ABZR87_RS21325 0.55 +0.7 1,166,528 + ABZR87_RS21325 0.69 +0.2 1,166,529 - ABZR87_RS21325 0.69 +0.0 1,166,561 + ABZR87_RS21325 0.75 +0.1 1,166,570 + ABZR87_RS21325 0.77 -0.4 1,166,570 + ABZR87_RS21325 0.77 -0.5 1,166,570 + ABZR87_RS21325 0.77 +0.6 1,166,570 + ABZR87_RS21325 0.77 +0.1 1,166,570 + ABZR87_RS21325 0.77 -0.4 1,166,570 + ABZR87_RS21325 0.77 -0.2 1,166,570 + ABZR87_RS21325 0.77 +0.1 1,166,571 - ABZR87_RS21325 0.77 +0.5 1,166,571 - ABZR87_RS21325 0.77 +0.3 1,166,571 - ABZR87_RS21325 0.77 +0.5 1,166,571 - ABZR87_RS21325 0.77 -0.4 1,166,571 - ABZR87_RS21325 0.77 -0.0 1,166,571 - ABZR87_RS21325 0.77 +0.5 1,166,571 - ABZR87_RS21325 0.77 -0.4 1,166,684 + +0.3 1,166,684 + -0.0 1,166,684 + -0.0 1,166,749 + +0.3 1,166,749 + -0.1 1,166,749 + +0.4 1,166,750 - +0.4 1,167,070 + ABZR87_RS21330 0.33 -0.3 1,167,070 + ABZR87_RS21330 0.33 -0.2 1,167,071 - ABZR87_RS21330 0.33 +0.4 1,167,071 - ABZR87_RS21330 0.33 -0.1 1,167,071 - ABZR87_RS21330 0.33 +0.9 1,167,302 + ABZR87_RS21330 0.57 +0.5 1,167,303 - ABZR87_RS21330 0.58 +0.5 1,167,303 - ABZR87_RS21330 0.58 +0.2 1,167,406 + ABZR87_RS21330 0.68 +0.2 1,167,406 + ABZR87_RS21330 0.68 +0.1 1,167,512 + ABZR87_RS21330 0.79 +0.4 1,167,581 + ABZR87_RS21330 0.87 +0.1 1,167,582 - ABZR87_RS21330 0.87 +0.2
Or see this region's nucleotide sequence