Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS18880 and ABZR87_RS18885 are separated by 304 nucleotides ABZR87_RS18885 and ABZR87_RS18890 are separated by 180 nucleotides
ABZR87_RS18880: ABZR87_RS18880 - FAD-dependent oxidoreductase, at 588,860 to 590,086
_RS18880
ABZR87_RS18885: ABZR87_RS18885 - nitrate reductase, at 590,391 to 593,126
_RS18885
ABZR87_RS18890: ABZR87_RS18890 - hypothetical protein, at 593,307 to 594,866
_RS18890
Position (kb)
590
591
592
593
594 Strain fitness (log2 ratio)
-2
-1
0
1 at 589.587 kb on + strand, within ABZR87_RS18880 at 589.587 kb on + strand, within ABZR87_RS18880 at 589.587 kb on + strand, within ABZR87_RS18880 at 589.667 kb on + strand, within ABZR87_RS18880 at 589.668 kb on - strand, within ABZR87_RS18880 at 589.668 kb on - strand, within ABZR87_RS18880 at 589.668 kb on - strand, within ABZR87_RS18880 at 589.668 kb on - strand, within ABZR87_RS18880 at 589.668 kb on - strand, within ABZR87_RS18880 at 589.678 kb on + strand, within ABZR87_RS18880 at 589.796 kb on + strand, within ABZR87_RS18880 at 589.797 kb on - strand, within ABZR87_RS18880 at 589.797 kb on - strand, within ABZR87_RS18880 at 589.797 kb on - strand, within ABZR87_RS18880 at 589.797 kb on - strand, within ABZR87_RS18880 at 589.797 kb on - strand, within ABZR87_RS18880 at 589.798 kb on + strand, within ABZR87_RS18880 at 589.798 kb on + strand, within ABZR87_RS18880 at 589.847 kb on + strand, within ABZR87_RS18880 at 589.848 kb on - strand, within ABZR87_RS18880 at 589.848 kb on - strand, within ABZR87_RS18880 at 589.919 kb on + strand, within ABZR87_RS18880 at 589.995 kb on - strand at 590.125 kb on + strand at 590.150 kb on + strand at 590.151 kb on - strand at 590.160 kb on - strand at 590.416 kb on + strand at 590.416 kb on + strand at 590.445 kb on + strand at 590.446 kb on - strand at 590.548 kb on + strand at 590.548 kb on + strand at 590.742 kb on + strand, within ABZR87_RS18885 at 590.742 kb on + strand, within ABZR87_RS18885 at 590.772 kb on + strand, within ABZR87_RS18885 at 590.772 kb on + strand, within ABZR87_RS18885 at 590.772 kb on + strand, within ABZR87_RS18885 at 590.772 kb on + strand, within ABZR87_RS18885 at 590.772 kb on + strand, within ABZR87_RS18885 at 590.772 kb on + strand, within ABZR87_RS18885 at 590.773 kb on - strand, within ABZR87_RS18885 at 590.773 kb on - strand, within ABZR87_RS18885 at 590.773 kb on - strand, within ABZR87_RS18885 at 590.775 kb on + strand, within ABZR87_RS18885 at 590.775 kb on + strand, within ABZR87_RS18885 at 590.776 kb on - strand, within ABZR87_RS18885 at 590.825 kb on + strand, within ABZR87_RS18885 at 590.829 kb on - strand, within ABZR87_RS18885 at 590.904 kb on + strand, within ABZR87_RS18885 at 590.904 kb on + strand, within ABZR87_RS18885 at 590.904 kb on + strand, within ABZR87_RS18885 at 590.905 kb on - strand, within ABZR87_RS18885 at 590.905 kb on - strand, within ABZR87_RS18885 at 591.279 kb on + strand, within ABZR87_RS18885 at 591.279 kb on + strand, within ABZR87_RS18885 at 591.279 kb on + strand, within ABZR87_RS18885 at 591.279 kb on + strand, within ABZR87_RS18885 at 591.280 kb on - strand, within ABZR87_RS18885 at 591.280 kb on - strand, within ABZR87_RS18885 at 592.045 kb on - strand, within ABZR87_RS18885 at 592.045 kb on - strand, within ABZR87_RS18885 at 592.045 kb on - strand, within ABZR87_RS18885 at 592.653 kb on + strand, within ABZR87_RS18885 at 592.653 kb on + strand, within ABZR87_RS18885 at 592.653 kb on + strand, within ABZR87_RS18885 at 592.654 kb on - strand, within ABZR87_RS18885 at 592.654 kb on - strand, within ABZR87_RS18885 at 592.654 kb on - strand, within ABZR87_RS18885 at 592.746 kb on + strand, within ABZR87_RS18885 at 593.204 kb on + strand at 593.204 kb on + strand at 593.205 kb on - strand at 593.205 kb on - strand at 593.205 kb on - strand at 593.264 kb on - strand at 593.284 kb on + strand at 593.284 kb on + strand at 593.285 kb on - strand at 593.285 kb on - strand at 593.292 kb on - strand at 593.308 kb on + strand at 593.308 kb on + strand at 593.308 kb on + strand at 593.308 kb on + strand at 593.308 kb on + strand at 593.309 kb on - strand at 593.309 kb on - strand at 593.309 kb on - strand at 593.309 kb on - strand at 593.309 kb on - strand at 593.345 kb on - strand at 593.535 kb on + strand, within ABZR87_RS18890 at 593.535 kb on + strand, within ABZR87_RS18890 at 593.535 kb on + strand, within ABZR87_RS18890 at 593.535 kb on + strand, within ABZR87_RS18890 at 593.535 kb on + strand, within ABZR87_RS18890 at 593.535 kb on + strand, within ABZR87_RS18890 at 593.536 kb on - strand, within ABZR87_RS18890 at 593.536 kb on - strand, within ABZR87_RS18890 at 593.671 kb on + strand, within ABZR87_RS18890 at 593.672 kb on - strand, within ABZR87_RS18890 at 593.794 kb on + strand, within ABZR87_RS18890 at 593.794 kb on + strand, within ABZR87_RS18890 at 593.794 kb on + strand, within ABZR87_RS18890 at 593.795 kb on - strand, within ABZR87_RS18890 at 593.795 kb on - strand, within ABZR87_RS18890 at 593.908 kb on + strand, within ABZR87_RS18890 at 593.944 kb on + strand, within ABZR87_RS18890 at 593.944 kb on + strand, within ABZR87_RS18890 at 593.944 kb on + strand, within ABZR87_RS18890 at 593.968 kb on + strand, within ABZR87_RS18890
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 589,587 + ABZR87_RS18880 0.59 +0.2 589,587 + ABZR87_RS18880 0.59 +0.5 589,587 + ABZR87_RS18880 0.59 +0.0 589,667 + ABZR87_RS18880 0.66 +0.1 589,668 - ABZR87_RS18880 0.66 +0.1 589,668 - ABZR87_RS18880 0.66 +0.4 589,668 - ABZR87_RS18880 0.66 -0.0 589,668 - ABZR87_RS18880 0.66 +0.0 589,668 - ABZR87_RS18880 0.66 -0.2 589,678 + ABZR87_RS18880 0.67 -0.6 589,796 + ABZR87_RS18880 0.76 -0.9 589,797 - ABZR87_RS18880 0.76 -0.7 589,797 - ABZR87_RS18880 0.76 -0.0 589,797 - ABZR87_RS18880 0.76 -0.3 589,797 - ABZR87_RS18880 0.76 +1.0 589,797 - ABZR87_RS18880 0.76 +0.1 589,798 + ABZR87_RS18880 0.76 -1.0 589,798 + ABZR87_RS18880 0.76 -0.7 589,847 + ABZR87_RS18880 0.80 +0.2 589,848 - ABZR87_RS18880 0.81 +0.0 589,848 - ABZR87_RS18880 0.81 -0.3 589,919 + ABZR87_RS18880 0.86 +0.7 589,995 - +0.3 590,125 + -0.7 590,150 + -0.8 590,151 - -0.0 590,160 - +0.5 590,416 + +0.2 590,416 + -0.3 590,445 + -0.1 590,446 - +0.1 590,548 + -0.4 590,548 + -0.6 590,742 + ABZR87_RS18885 0.13 -0.1 590,742 + ABZR87_RS18885 0.13 +1.0 590,772 + ABZR87_RS18885 0.14 -0.3 590,772 + ABZR87_RS18885 0.14 -0.1 590,772 + ABZR87_RS18885 0.14 +0.1 590,772 + ABZR87_RS18885 0.14 +0.1 590,772 + ABZR87_RS18885 0.14 +0.4 590,772 + ABZR87_RS18885 0.14 +0.4 590,773 - ABZR87_RS18885 0.14 +0.0 590,773 - ABZR87_RS18885 0.14 +0.0 590,773 - ABZR87_RS18885 0.14 -0.6 590,775 + ABZR87_RS18885 0.14 +0.4 590,775 + ABZR87_RS18885 0.14 +0.3 590,776 - ABZR87_RS18885 0.14 +0.1 590,825 + ABZR87_RS18885 0.16 -0.6 590,829 - ABZR87_RS18885 0.16 +0.1 590,904 + ABZR87_RS18885 0.19 -1.2 590,904 + ABZR87_RS18885 0.19 -0.0 590,904 + ABZR87_RS18885 0.19 -0.3 590,905 - ABZR87_RS18885 0.19 -0.5 590,905 - ABZR87_RS18885 0.19 +0.4 591,279 + ABZR87_RS18885 0.32 +0.7 591,279 + ABZR87_RS18885 0.32 +0.7 591,279 + ABZR87_RS18885 0.32 -0.9 591,279 + ABZR87_RS18885 0.32 +0.5 591,280 - ABZR87_RS18885 0.32 +0.4 591,280 - ABZR87_RS18885 0.32 -1.0 592,045 - ABZR87_RS18885 0.60 -0.4 592,045 - ABZR87_RS18885 0.60 +0.3 592,045 - ABZR87_RS18885 0.60 +0.9 592,653 + ABZR87_RS18885 0.83 +0.2 592,653 + ABZR87_RS18885 0.83 +0.4 592,653 + ABZR87_RS18885 0.83 +0.5 592,654 - ABZR87_RS18885 0.83 +0.6 592,654 - ABZR87_RS18885 0.83 +0.2 592,654 - ABZR87_RS18885 0.83 -0.1 592,746 + ABZR87_RS18885 0.86 +0.2 593,204 + -1.6 593,204 + -0.5 593,205 - -0.1 593,205 - +0.2 593,205 - -0.2 593,264 - -0.3 593,284 + -0.6 593,284 + -0.0 593,285 - -0.3 593,285 - -0.4 593,292 - +0.3 593,308 + +0.3 593,308 + -0.2 593,308 + -0.3 593,308 + +1.5 593,308 + -0.5 593,309 - +0.1 593,309 - +0.1 593,309 - -0.7 593,309 - -0.1 593,309 - +0.2 593,345 - -0.1 593,535 + ABZR87_RS18890 0.15 +1.3 593,535 + ABZR87_RS18890 0.15 +0.5 593,535 + ABZR87_RS18890 0.15 +0.0 593,535 + ABZR87_RS18890 0.15 +0.8 593,535 + ABZR87_RS18890 0.15 +0.2 593,535 + ABZR87_RS18890 0.15 -1.9 593,536 - ABZR87_RS18890 0.15 +0.8 593,536 - ABZR87_RS18890 0.15 +0.2 593,671 + ABZR87_RS18890 0.23 +0.5 593,672 - ABZR87_RS18890 0.23 -0.6 593,794 + ABZR87_RS18890 0.31 -0.2 593,794 + ABZR87_RS18890 0.31 +0.2 593,794 + ABZR87_RS18890 0.31 +1.0 593,795 - ABZR87_RS18890 0.31 +0.5 593,795 - ABZR87_RS18890 0.31 -0.4 593,908 + ABZR87_RS18890 0.39 -1.5 593,944 + ABZR87_RS18890 0.41 -0.6 593,944 + ABZR87_RS18890 0.41 +0.3 593,944 + ABZR87_RS18890 0.41 +0.4 593,968 + ABZR87_RS18890 0.42 -0.3
Or see this region's nucleotide sequence