Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13745 and ABZR87_RS13750 are separated by 39 nucleotides ABZR87_RS13750 and ABZR87_RS13755 are separated by 30 nucleotides
ABZR87_RS13745: ABZR87_RS13745 - bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 2,899,164 to 2,901,389
_RS13745
ABZR87_RS13750: ABZR87_RS13750 - RidA family protein, at 2,901,429 to 2,901,797
_RS13750
ABZR87_RS13755: ABZR87_RS13755 - alpha/beta hydrolase, at 2,901,828 to 2,902,697
_RS13755
Position (kb)
2901
2902 Strain fitness (log2 ratio)
-2
-1
0
1 at 2900.443 kb on + strand, within ABZR87_RS13745 at 2900.443 kb on + strand, within ABZR87_RS13745 at 2900.443 kb on + strand, within ABZR87_RS13745 at 2900.444 kb on - strand, within ABZR87_RS13745 at 2900.444 kb on - strand, within ABZR87_RS13745 at 2900.444 kb on - strand, within ABZR87_RS13745 at 2900.470 kb on + strand, within ABZR87_RS13745 at 2900.470 kb on + strand, within ABZR87_RS13745 at 2900.470 kb on + strand, within ABZR87_RS13745 at 2900.470 kb on + strand, within ABZR87_RS13745 at 2900.471 kb on - strand, within ABZR87_RS13745 at 2900.482 kb on + strand, within ABZR87_RS13745 at 2900.530 kb on + strand, within ABZR87_RS13745 at 2900.530 kb on + strand, within ABZR87_RS13745 at 2900.530 kb on + strand, within ABZR87_RS13745 at 2900.531 kb on - strand, within ABZR87_RS13745 at 2900.578 kb on + strand, within ABZR87_RS13745 at 2900.579 kb on - strand, within ABZR87_RS13745 at 2900.629 kb on + strand, within ABZR87_RS13745 at 2900.629 kb on + strand, within ABZR87_RS13745 at 2900.629 kb on + strand, within ABZR87_RS13745 at 2900.629 kb on + strand, within ABZR87_RS13745 at 2900.630 kb on - strand, within ABZR87_RS13745 at 2900.630 kb on - strand, within ABZR87_RS13745 at 2900.630 kb on - strand, within ABZR87_RS13745 at 2900.630 kb on - strand, within ABZR87_RS13745 at 2900.767 kb on + strand, within ABZR87_RS13745 at 2900.767 kb on + strand, within ABZR87_RS13745 at 2900.767 kb on + strand, within ABZR87_RS13745 at 2900.767 kb on + strand, within ABZR87_RS13745 at 2900.771 kb on + strand, within ABZR87_RS13745 at 2900.771 kb on + strand, within ABZR87_RS13745 at 2900.771 kb on + strand, within ABZR87_RS13745 at 2900.854 kb on + strand, within ABZR87_RS13745 at 2900.854 kb on + strand, within ABZR87_RS13745 at 2900.855 kb on - strand, within ABZR87_RS13745 at 2900.855 kb on - strand, within ABZR87_RS13745 at 2900.855 kb on - strand, within ABZR87_RS13745 at 2900.855 kb on - strand, within ABZR87_RS13745 at 2900.858 kb on + strand, within ABZR87_RS13745 at 2900.858 kb on + strand, within ABZR87_RS13745 at 2900.859 kb on - strand, within ABZR87_RS13745 at 2900.859 kb on - strand, within ABZR87_RS13745 at 2901.316 kb on + strand at 2901.317 kb on - strand at 2901.317 kb on - strand at 2901.469 kb on + strand, within ABZR87_RS13750 at 2901.470 kb on - strand, within ABZR87_RS13750 at 2901.724 kb on + strand, within ABZR87_RS13750 at 2901.724 kb on + strand, within ABZR87_RS13750 at 2901.739 kb on + strand, within ABZR87_RS13750 at 2901.739 kb on + strand, within ABZR87_RS13750 at 2901.739 kb on + strand, within ABZR87_RS13750 at 2901.739 kb on + strand, within ABZR87_RS13750 at 2901.740 kb on - strand, within ABZR87_RS13750 at 2901.740 kb on - strand, within ABZR87_RS13750 at 2901.758 kb on - strand, within ABZR87_RS13750 at 2901.775 kb on + strand at 2901.775 kb on + strand at 2901.775 kb on + strand at 2901.775 kb on + strand at 2901.775 kb on + strand at 2901.776 kb on - strand at 2901.776 kb on - strand at 2902.102 kb on + strand, within ABZR87_RS13755 at 2902.102 kb on + strand, within ABZR87_RS13755 at 2902.103 kb on - strand, within ABZR87_RS13755 at 2902.103 kb on - strand, within ABZR87_RS13755 at 2902.208 kb on - strand, within ABZR87_RS13755 at 2902.255 kb on + strand, within ABZR87_RS13755 at 2902.255 kb on + strand, within ABZR87_RS13755 at 2902.255 kb on + strand, within ABZR87_RS13755 at 2902.255 kb on + strand, within ABZR87_RS13755 at 2902.255 kb on + strand, within ABZR87_RS13755 at 2902.255 kb on + strand, within ABZR87_RS13755 at 2902.255 kb on + strand, within ABZR87_RS13755 at 2902.256 kb on - strand, within ABZR87_RS13755 at 2902.379 kb on + strand, within ABZR87_RS13755 at 2902.441 kb on + strand, within ABZR87_RS13755 at 2902.442 kb on - strand, within ABZR87_RS13755 at 2902.456 kb on + strand, within ABZR87_RS13755 at 2902.456 kb on + strand, within ABZR87_RS13755 at 2902.456 kb on + strand, within ABZR87_RS13755 at 2902.456 kb on + strand, within ABZR87_RS13755 at 2902.457 kb on - strand, within ABZR87_RS13755 at 2902.457 kb on - strand, within ABZR87_RS13755 at 2902.457 kb on - strand, within ABZR87_RS13755 at 2902.457 kb on - strand, within ABZR87_RS13755 at 2902.522 kb on + strand, within ABZR87_RS13755 at 2902.522 kb on + strand, within ABZR87_RS13755 at 2902.523 kb on - strand, within ABZR87_RS13755 at 2902.631 kb on - strand at 2902.708 kb on + strand at 2902.708 kb on + strand at 2902.744 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,900,443 + ABZR87_RS13745 0.57 -0.5 2,900,443 + ABZR87_RS13745 0.57 -1.1 2,900,443 + ABZR87_RS13745 0.57 -0.4 2,900,444 - ABZR87_RS13745 0.58 -1.4 2,900,444 - ABZR87_RS13745 0.58 -0.8 2,900,444 - ABZR87_RS13745 0.58 -0.9 2,900,470 + ABZR87_RS13745 0.59 -0.2 2,900,470 + ABZR87_RS13745 0.59 -0.8 2,900,470 + ABZR87_RS13745 0.59 +0.6 2,900,470 + ABZR87_RS13745 0.59 -0.3 2,900,471 - ABZR87_RS13745 0.59 -0.7 2,900,482 + ABZR87_RS13745 0.59 -1.9 2,900,530 + ABZR87_RS13745 0.61 -1.4 2,900,530 + ABZR87_RS13745 0.61 +0.5 2,900,530 + ABZR87_RS13745 0.61 -0.8 2,900,531 - ABZR87_RS13745 0.61 -1.1 2,900,578 + ABZR87_RS13745 0.64 -0.7 2,900,579 - ABZR87_RS13745 0.64 +0.4 2,900,629 + ABZR87_RS13745 0.66 -2.1 2,900,629 + ABZR87_RS13745 0.66 -0.1 2,900,629 + ABZR87_RS13745 0.66 -0.4 2,900,629 + ABZR87_RS13745 0.66 -0.7 2,900,630 - ABZR87_RS13745 0.66 -0.0 2,900,630 - ABZR87_RS13745 0.66 -1.0 2,900,630 - ABZR87_RS13745 0.66 +0.1 2,900,630 - ABZR87_RS13745 0.66 +0.2 2,900,767 + ABZR87_RS13745 0.72 +0.2 2,900,767 + ABZR87_RS13745 0.72 -0.1 2,900,767 + ABZR87_RS13745 0.72 -0.5 2,900,767 + ABZR87_RS13745 0.72 +0.2 2,900,771 + ABZR87_RS13745 0.72 +0.7 2,900,771 + ABZR87_RS13745 0.72 -0.7 2,900,771 + ABZR87_RS13745 0.72 +0.7 2,900,854 + ABZR87_RS13745 0.76 -0.6 2,900,854 + ABZR87_RS13745 0.76 -0.2 2,900,855 - ABZR87_RS13745 0.76 -0.6 2,900,855 - ABZR87_RS13745 0.76 -1.4 2,900,855 - ABZR87_RS13745 0.76 -0.3 2,900,855 - ABZR87_RS13745 0.76 -0.1 2,900,858 + ABZR87_RS13745 0.76 -0.5 2,900,858 + ABZR87_RS13745 0.76 -0.4 2,900,859 - ABZR87_RS13745 0.76 -0.8 2,900,859 - ABZR87_RS13745 0.76 +0.4 2,901,316 + -1.0 2,901,317 - -1.7 2,901,317 - -0.6 2,901,469 + ABZR87_RS13750 0.11 -0.7 2,901,470 - ABZR87_RS13750 0.11 -0.8 2,901,724 + ABZR87_RS13750 0.80 -0.6 2,901,724 + ABZR87_RS13750 0.80 -0.7 2,901,739 + ABZR87_RS13750 0.84 +1.5 2,901,739 + ABZR87_RS13750 0.84 -0.0 2,901,739 + ABZR87_RS13750 0.84 -1.3 2,901,739 + ABZR87_RS13750 0.84 -0.5 2,901,740 - ABZR87_RS13750 0.84 +0.3 2,901,740 - ABZR87_RS13750 0.84 -1.1 2,901,758 - ABZR87_RS13750 0.89 -1.9 2,901,775 + -0.1 2,901,775 + +0.7 2,901,775 + +0.7 2,901,775 + -0.3 2,901,775 + -0.7 2,901,776 - -0.0 2,901,776 - -1.0 2,902,102 + ABZR87_RS13755 0.31 -0.5 2,902,102 + ABZR87_RS13755 0.31 +1.0 2,902,103 - ABZR87_RS13755 0.32 -0.4 2,902,103 - ABZR87_RS13755 0.32 -0.3 2,902,208 - ABZR87_RS13755 0.44 +0.7 2,902,255 + ABZR87_RS13755 0.49 -0.1 2,902,255 + ABZR87_RS13755 0.49 +0.2 2,902,255 + ABZR87_RS13755 0.49 -0.7 2,902,255 + ABZR87_RS13755 0.49 -2.0 2,902,255 + ABZR87_RS13755 0.49 -0.5 2,902,255 + ABZR87_RS13755 0.49 +0.2 2,902,255 + ABZR87_RS13755 0.49 -0.6 2,902,256 - ABZR87_RS13755 0.49 -1.2 2,902,379 + ABZR87_RS13755 0.63 -0.7 2,902,441 + ABZR87_RS13755 0.70 -0.9 2,902,442 - ABZR87_RS13755 0.71 -0.2 2,902,456 + ABZR87_RS13755 0.72 -0.3 2,902,456 + ABZR87_RS13755 0.72 +0.0 2,902,456 + ABZR87_RS13755 0.72 -0.7 2,902,456 + ABZR87_RS13755 0.72 -1.1 2,902,457 - ABZR87_RS13755 0.72 -0.5 2,902,457 - ABZR87_RS13755 0.72 +0.1 2,902,457 - ABZR87_RS13755 0.72 -0.1 2,902,457 - ABZR87_RS13755 0.72 +0.8 2,902,522 + ABZR87_RS13755 0.80 -0.3 2,902,522 + ABZR87_RS13755 0.80 -0.2 2,902,523 - ABZR87_RS13755 0.80 -0.9 2,902,631 - -0.1 2,902,708 + +0.5 2,902,708 + -0.0 2,902,744 - +0.4
Or see this region's nucleotide sequence