Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11760 and ABZR87_RS11765 are separated by 60 nucleotides ABZR87_RS11765 and ABZR87_RS11770 are separated by 45 nucleotides ABZR87_RS11770 and ABZR87_RS11775 are separated by 141 nucleotides
ABZR87_RS11760: ABZR87_RS11760 - membrane protein, at 2,492,227 to 2,492,640
_RS11760
ABZR87_RS11765: ABZR87_RS11765 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 2,492,701 to 2,493,528
_RS11765
ABZR87_RS11770: ABZR87_RS11770 - succinyldiaminopimelate transaminase, at 2,493,574 to 2,494,773
_RS11770
ABZR87_RS11775: ABZR87_RS11775 - DMT family transporter, at 2,494,915 to 2,495,835
_RS11775
Position (kb)
2493
2494
2495 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2492.676 kb on + strand at 2492.676 kb on + strand at 2492.703 kb on - strand at 2493.657 kb on - strand at 2493.698 kb on + strand, within ABZR87_RS11770 at 2493.699 kb on - strand, within ABZR87_RS11770 at 2493.699 kb on - strand, within ABZR87_RS11770 at 2493.794 kb on + strand, within ABZR87_RS11770 at 2493.794 kb on + strand, within ABZR87_RS11770 at 2493.794 kb on + strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.795 kb on - strand, within ABZR87_RS11770 at 2493.959 kb on + strand, within ABZR87_RS11770 at 2493.960 kb on - strand, within ABZR87_RS11770 at 2493.960 kb on - strand, within ABZR87_RS11770 at 2493.968 kb on + strand, within ABZR87_RS11770 at 2493.969 kb on - strand, within ABZR87_RS11770 at 2493.969 kb on - strand, within ABZR87_RS11770 at 2493.977 kb on + strand, within ABZR87_RS11770 at 2493.977 kb on + strand, within ABZR87_RS11770 at 2493.977 kb on + strand, within ABZR87_RS11770 at 2494.151 kb on + strand, within ABZR87_RS11770 at 2494.151 kb on + strand, within ABZR87_RS11770 at 2494.152 kb on - strand, within ABZR87_RS11770 at 2494.152 kb on - strand, within ABZR87_RS11770 at 2494.258 kb on + strand, within ABZR87_RS11770 at 2494.258 kb on + strand, within ABZR87_RS11770 at 2494.258 kb on + strand, within ABZR87_RS11770 at 2494.258 kb on + strand, within ABZR87_RS11770 at 2494.259 kb on - strand, within ABZR87_RS11770 at 2494.259 kb on - strand, within ABZR87_RS11770 at 2494.259 kb on - strand, within ABZR87_RS11770 at 2494.319 kb on + strand, within ABZR87_RS11770 at 2494.319 kb on + strand, within ABZR87_RS11770 at 2494.319 kb on + strand, within ABZR87_RS11770 at 2494.320 kb on - strand, within ABZR87_RS11770 at 2494.320 kb on - strand, within ABZR87_RS11770 at 2494.320 kb on - strand, within ABZR87_RS11770 at 2494.320 kb on - strand, within ABZR87_RS11770 at 2494.385 kb on + strand, within ABZR87_RS11770 at 2494.386 kb on - strand, within ABZR87_RS11770 at 2494.386 kb on - strand, within ABZR87_RS11770 at 2494.386 kb on - strand, within ABZR87_RS11770 at 2494.395 kb on - strand, within ABZR87_RS11770 at 2494.395 kb on - strand, within ABZR87_RS11770 at 2494.530 kb on - strand, within ABZR87_RS11770 at 2494.592 kb on + strand, within ABZR87_RS11770 at 2494.839 kb on + strand at 2494.926 kb on - strand at 2494.926 kb on - strand at 2494.988 kb on + strand at 2494.988 kb on + strand at 2494.989 kb on - strand at 2495.027 kb on - strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.245 kb on + strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.246 kb on - strand, within ABZR87_RS11775 at 2495.598 kb on + strand, within ABZR87_RS11775 at 2495.598 kb on + strand, within ABZR87_RS11775 at 2495.598 kb on + strand, within ABZR87_RS11775 at 2495.599 kb on - strand, within ABZR87_RS11775 at 2495.599 kb on - strand, within ABZR87_RS11775 at 2495.599 kb on - strand, within ABZR87_RS11775
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,492,676 + +0.7 2,492,676 + -0.5 2,492,703 - -0.2 2,493,657 - -0.4 2,493,698 + ABZR87_RS11770 0.10 -2.3 2,493,699 - ABZR87_RS11770 0.10 +1.9 2,493,699 - ABZR87_RS11770 0.10 +0.2 2,493,794 + ABZR87_RS11770 0.18 -1.1 2,493,794 + ABZR87_RS11770 0.18 -2.0 2,493,794 + ABZR87_RS11770 0.18 -1.3 2,493,795 - ABZR87_RS11770 0.18 +0.6 2,493,795 - ABZR87_RS11770 0.18 -1.0 2,493,795 - ABZR87_RS11770 0.18 +0.2 2,493,795 - ABZR87_RS11770 0.18 -0.1 2,493,795 - ABZR87_RS11770 0.18 -0.1 2,493,795 - ABZR87_RS11770 0.18 -0.0 2,493,795 - ABZR87_RS11770 0.18 -0.2 2,493,795 - ABZR87_RS11770 0.18 +0.4 2,493,959 + ABZR87_RS11770 0.32 -3.6 2,493,960 - ABZR87_RS11770 0.32 +0.5 2,493,960 - ABZR87_RS11770 0.32 -0.1 2,493,968 + ABZR87_RS11770 0.33 -3.0 2,493,969 - ABZR87_RS11770 0.33 -0.4 2,493,969 - ABZR87_RS11770 0.33 -0.5 2,493,977 + ABZR87_RS11770 0.34 -3.6 2,493,977 + ABZR87_RS11770 0.34 -2.4 2,493,977 + ABZR87_RS11770 0.34 -3.7 2,494,151 + ABZR87_RS11770 0.48 -3.0 2,494,151 + ABZR87_RS11770 0.48 -2.8 2,494,152 - ABZR87_RS11770 0.48 -0.1 2,494,152 - ABZR87_RS11770 0.48 -2.4 2,494,258 + ABZR87_RS11770 0.57 -3.2 2,494,258 + ABZR87_RS11770 0.57 -2.3 2,494,258 + ABZR87_RS11770 0.57 -2.9 2,494,258 + ABZR87_RS11770 0.57 -3.0 2,494,259 - ABZR87_RS11770 0.57 -0.5 2,494,259 - ABZR87_RS11770 0.57 -0.3 2,494,259 - ABZR87_RS11770 0.57 -0.2 2,494,319 + ABZR87_RS11770 0.62 -4.6 2,494,319 + ABZR87_RS11770 0.62 -2.2 2,494,319 + ABZR87_RS11770 0.62 -3.3 2,494,320 - ABZR87_RS11770 0.62 -0.0 2,494,320 - ABZR87_RS11770 0.62 -1.7 2,494,320 - ABZR87_RS11770 0.62 -0.8 2,494,320 - ABZR87_RS11770 0.62 -0.3 2,494,385 + ABZR87_RS11770 0.68 -1.7 2,494,386 - ABZR87_RS11770 0.68 -0.3 2,494,386 - ABZR87_RS11770 0.68 -0.7 2,494,386 - ABZR87_RS11770 0.68 -0.5 2,494,395 - ABZR87_RS11770 0.68 -0.0 2,494,395 - ABZR87_RS11770 0.68 -0.3 2,494,530 - ABZR87_RS11770 0.80 -0.2 2,494,592 + ABZR87_RS11770 0.85 -3.2 2,494,839 + -2.8 2,494,926 - -2.1 2,494,926 - +0.3 2,494,988 + -0.0 2,494,988 + +0.3 2,494,989 - -0.3 2,495,027 - ABZR87_RS11775 0.12 +0.3 2,495,245 + ABZR87_RS11775 0.36 +0.2 2,495,245 + ABZR87_RS11775 0.36 -0.6 2,495,245 + ABZR87_RS11775 0.36 -0.3 2,495,245 + ABZR87_RS11775 0.36 -0.0 2,495,246 - ABZR87_RS11775 0.36 +0.6 2,495,246 - ABZR87_RS11775 0.36 -0.0 2,495,246 - ABZR87_RS11775 0.36 +0.0 2,495,246 - ABZR87_RS11775 0.36 +0.7 2,495,598 + ABZR87_RS11775 0.74 -0.0 2,495,598 + ABZR87_RS11775 0.74 -0.7 2,495,598 + ABZR87_RS11775 0.74 -0.7 2,495,599 - ABZR87_RS11775 0.74 -0.8 2,495,599 - ABZR87_RS11775 0.74 +1.0 2,495,599 - ABZR87_RS11775 0.74 +0.0
Or see this region's nucleotide sequence