Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS06885 and ABZR87_RS06890 are separated by 477 nucleotides ABZR87_RS06890 and ABZR87_RS06895 are separated by 18 nucleotides ABZR87_RS06895 and ABZR87_RS06900 are separated by 55 nucleotides
ABZR87_RS06885: ABZR87_RS06885 - Crp/Fnr family transcriptional regulator, at 1,458,104 to 1,458,694
_RS06885
ABZR87_RS06890: ABZR87_RS06890 - ABC transporter ATP-binding protein, at 1,459,172 to 1,459,975
_RS06890
ABZR87_RS06895: ABZR87_RS06895 - nitrate ABC transporter permease, at 1,459,994 to 1,460,845
_RS06895
ABZR87_RS06900: ABZR87_RS06900 - CmpA/NrtA family ABC transporter substrate-binding protein, at 1,460,901 to 1,462,181
_RS06900
Position (kb)
1459
1460 Strain fitness (log2 ratio)
-1
0
1 at 1458.309 kb on + strand, within ABZR87_RS06885 at 1458.309 kb on + strand, within ABZR87_RS06885 at 1458.309 kb on + strand, within ABZR87_RS06885 at 1458.309 kb on + strand, within ABZR87_RS06885 at 1458.309 kb on + strand, within ABZR87_RS06885 at 1458.309 kb on + strand, within ABZR87_RS06885 at 1458.309 kb on + strand, within ABZR87_RS06885 at 1458.310 kb on - strand, within ABZR87_RS06885 at 1458.310 kb on - strand, within ABZR87_RS06885 at 1458.310 kb on - strand, within ABZR87_RS06885 at 1458.310 kb on - strand, within ABZR87_RS06885 at 1458.310 kb on - strand, within ABZR87_RS06885 at 1458.318 kb on - strand, within ABZR87_RS06885 at 1458.319 kb on - strand, within ABZR87_RS06885 at 1458.319 kb on - strand, within ABZR87_RS06885 at 1458.319 kb on - strand, within ABZR87_RS06885 at 1458.412 kb on + strand, within ABZR87_RS06885 at 1458.412 kb on + strand, within ABZR87_RS06885 at 1458.413 kb on - strand, within ABZR87_RS06885 at 1458.480 kb on + strand, within ABZR87_RS06885 at 1458.480 kb on + strand, within ABZR87_RS06885 at 1458.480 kb on + strand, within ABZR87_RS06885 at 1458.480 kb on + strand, within ABZR87_RS06885 at 1458.480 kb on + strand, within ABZR87_RS06885 at 1458.481 kb on - strand, within ABZR87_RS06885 at 1458.481 kb on - strand, within ABZR87_RS06885 at 1458.481 kb on - strand, within ABZR87_RS06885 at 1458.513 kb on + strand, within ABZR87_RS06885 at 1458.513 kb on + strand, within ABZR87_RS06885 at 1458.513 kb on + strand, within ABZR87_RS06885 at 1458.513 kb on + strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.514 kb on - strand, within ABZR87_RS06885 at 1458.657 kb on + strand at 1458.657 kb on + strand at 1458.658 kb on - strand at 1458.658 kb on - strand at 1458.772 kb on + strand at 1458.773 kb on - strand at 1458.773 kb on - strand at 1458.818 kb on + strand at 1458.818 kb on + strand at 1458.818 kb on + strand at 1458.818 kb on + strand at 1458.818 kb on + strand at 1458.818 kb on + strand at 1458.818 kb on + strand at 1458.819 kb on - strand at 1458.819 kb on - strand at 1458.819 kb on - strand at 1458.819 kb on - strand at 1458.819 kb on - strand at 1458.819 kb on - strand at 1458.820 kb on - strand at 1458.934 kb on + strand at 1458.934 kb on + strand at 1458.935 kb on - strand at 1458.935 kb on - strand at 1458.935 kb on - strand at 1458.935 kb on - strand at 1458.935 kb on - strand at 1459.245 kb on + strand at 1459.245 kb on + strand at 1459.245 kb on + strand at 1459.245 kb on + strand at 1459.246 kb on - strand at 1459.677 kb on + strand, within ABZR87_RS06890 at 1459.677 kb on + strand, within ABZR87_RS06890 at 1459.677 kb on + strand, within ABZR87_RS06890 at 1459.677 kb on + strand, within ABZR87_RS06890 at 1459.834 kb on + strand, within ABZR87_RS06890 at 1460.007 kb on + strand at 1460.008 kb on - strand at 1460.220 kb on + strand, within ABZR87_RS06895 at 1460.220 kb on + strand, within ABZR87_RS06895 at 1460.220 kb on + strand, within ABZR87_RS06895 at 1460.221 kb on - strand, within ABZR87_RS06895 at 1460.221 kb on - strand, within ABZR87_RS06895 at 1460.221 kb on - strand, within ABZR87_RS06895 at 1460.243 kb on + strand, within ABZR87_RS06895 at 1460.244 kb on - strand, within ABZR87_RS06895 at 1460.244 kb on - strand, within ABZR87_RS06895 at 1460.298 kb on + strand, within ABZR87_RS06895 at 1460.298 kb on + strand, within ABZR87_RS06895 at 1460.298 kb on + strand, within ABZR87_RS06895 at 1460.613 kb on + strand, within ABZR87_RS06895 at 1460.613 kb on + strand, within ABZR87_RS06895 at 1460.929 kb on + strand at 1460.930 kb on - strand at 1460.930 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,458,309 + ABZR87_RS06885 0.35 -0.3 1,458,309 + ABZR87_RS06885 0.35 -0.4 1,458,309 + ABZR87_RS06885 0.35 +0.2 1,458,309 + ABZR87_RS06885 0.35 -0.0 1,458,309 + ABZR87_RS06885 0.35 -0.3 1,458,309 + ABZR87_RS06885 0.35 +0.3 1,458,309 + ABZR87_RS06885 0.35 -0.6 1,458,310 - ABZR87_RS06885 0.35 +1.5 1,458,310 - ABZR87_RS06885 0.35 -0.2 1,458,310 - ABZR87_RS06885 0.35 -0.1 1,458,310 - ABZR87_RS06885 0.35 -0.4 1,458,310 - ABZR87_RS06885 0.35 -0.2 1,458,318 - ABZR87_RS06885 0.36 +0.4 1,458,319 - ABZR87_RS06885 0.36 +0.3 1,458,319 - ABZR87_RS06885 0.36 +0.3 1,458,319 - ABZR87_RS06885 0.36 +0.2 1,458,412 + ABZR87_RS06885 0.52 -0.1 1,458,412 + ABZR87_RS06885 0.52 +0.8 1,458,413 - ABZR87_RS06885 0.52 +0.2 1,458,480 + ABZR87_RS06885 0.64 +0.0 1,458,480 + ABZR87_RS06885 0.64 +0.3 1,458,480 + ABZR87_RS06885 0.64 +0.2 1,458,480 + ABZR87_RS06885 0.64 +0.4 1,458,480 + ABZR87_RS06885 0.64 +0.5 1,458,481 - ABZR87_RS06885 0.64 +0.1 1,458,481 - ABZR87_RS06885 0.64 +0.2 1,458,481 - ABZR87_RS06885 0.64 +0.4 1,458,513 + ABZR87_RS06885 0.69 +0.0 1,458,513 + ABZR87_RS06885 0.69 -0.2 1,458,513 + ABZR87_RS06885 0.69 +0.2 1,458,513 + ABZR87_RS06885 0.69 -0.6 1,458,514 - ABZR87_RS06885 0.69 -0.3 1,458,514 - ABZR87_RS06885 0.69 +1.0 1,458,514 - ABZR87_RS06885 0.69 +0.6 1,458,514 - ABZR87_RS06885 0.69 -0.0 1,458,514 - ABZR87_RS06885 0.69 -0.6 1,458,514 - ABZR87_RS06885 0.69 +1.0 1,458,514 - ABZR87_RS06885 0.69 -1.2 1,458,514 - ABZR87_RS06885 0.69 +0.3 1,458,514 - ABZR87_RS06885 0.69 -0.4 1,458,657 + -0.2 1,458,657 + -0.2 1,458,658 - +0.1 1,458,658 - +0.3 1,458,772 + +0.2 1,458,773 - +1.5 1,458,773 - +0.0 1,458,818 + +1.0 1,458,818 + -1.4 1,458,818 + +0.2 1,458,818 + -0.7 1,458,818 + +0.5 1,458,818 + +0.4 1,458,818 + -0.0 1,458,819 - +0.0 1,458,819 - -0.0 1,458,819 - -0.4 1,458,819 - +0.2 1,458,819 - -0.1 1,458,819 - +0.3 1,458,820 - -0.8 1,458,934 + +0.4 1,458,934 + +0.0 1,458,935 - +0.1 1,458,935 - +0.4 1,458,935 - +0.1 1,458,935 - -0.8 1,458,935 - +0.6 1,459,245 + +0.6 1,459,245 + -0.4 1,459,245 + -0.3 1,459,245 + -0.5 1,459,246 - -0.6 1,459,677 + ABZR87_RS06890 0.63 +0.3 1,459,677 + ABZR87_RS06890 0.63 -0.2 1,459,677 + ABZR87_RS06890 0.63 +0.1 1,459,677 + ABZR87_RS06890 0.63 +0.7 1,459,834 + ABZR87_RS06890 0.82 +0.3 1,460,007 + +0.2 1,460,008 - +0.3 1,460,220 + ABZR87_RS06895 0.27 +1.3 1,460,220 + ABZR87_RS06895 0.27 +0.5 1,460,220 + ABZR87_RS06895 0.27 +0.2 1,460,221 - ABZR87_RS06895 0.27 -0.4 1,460,221 - ABZR87_RS06895 0.27 +0.2 1,460,221 - ABZR87_RS06895 0.27 +0.5 1,460,243 + ABZR87_RS06895 0.29 +0.2 1,460,244 - ABZR87_RS06895 0.29 -0.1 1,460,244 - ABZR87_RS06895 0.29 +0.8 1,460,298 + ABZR87_RS06895 0.36 -0.3 1,460,298 + ABZR87_RS06895 0.36 +0.0 1,460,298 + ABZR87_RS06895 0.36 -0.2 1,460,613 + ABZR87_RS06895 0.73 +0.6 1,460,613 + ABZR87_RS06895 0.73 +0.6 1,460,929 + +0.1 1,460,930 - +0.9 1,460,930 - +0.1
Or see this region's nucleotide sequence