Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04150 and ABZR87_RS04155 are separated by 5 nucleotides ABZR87_RS04155 and ABZR87_RS04160 are separated by 12 nucleotides ABZR87_RS04160 and ABZR87_RS04165 are separated by 105 nucleotides
ABZR87_RS04150: ABZR87_RS04150 - LysR family transcriptional regulator CrgA, at 870,432 to 871,340
_RS04150
ABZR87_RS04155: ABZR87_RS04155 - DUF3820 family protein, at 871,346 to 871,561
_RS04155
ABZR87_RS04160: ABZR87_RS04160 - LysR family transcriptional regulator, at 871,574 to 872,470
_RS04160
ABZR87_RS04165: ABZR87_RS04165 - SDR family oxidoreductase, at 872,576 to 873,544
_RS04165
Position (kb) 871
872
873 Strain fitness (log2 ratio) -1
0
1 at 870.627 kb on + strand, within ABZR87_RS04150 at 870.627 kb on + strand, within ABZR87_RS04150 at 870.627 kb on + strand, within ABZR87_RS04150 at 870.628 kb on - strand, within ABZR87_RS04150 at 870.628 kb on - strand, within ABZR87_RS04150 at 870.628 kb on - strand, within ABZR87_RS04150 at 870.628 kb on - strand, within ABZR87_RS04150 at 870.912 kb on + strand, within ABZR87_RS04150 at 870.912 kb on + strand, within ABZR87_RS04150 at 870.942 kb on + strand, within ABZR87_RS04150 at 870.942 kb on + strand, within ABZR87_RS04150 at 870.942 kb on + strand, within ABZR87_RS04150 at 870.943 kb on - strand, within ABZR87_RS04150 at 870.943 kb on - strand, within ABZR87_RS04150 at 870.943 kb on - strand, within ABZR87_RS04150 at 870.954 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.209 kb on + strand, within ABZR87_RS04150 at 871.210 kb on - strand, within ABZR87_RS04150 at 871.242 kb on + strand, within ABZR87_RS04150 at 871.243 kb on - strand, within ABZR87_RS04150 at 871.338 kb on + strand at 871.338 kb on + strand at 871.339 kb on - strand at 871.339 kb on - strand at 871.400 kb on + strand, within ABZR87_RS04155 at 871.400 kb on + strand, within ABZR87_RS04155 at 871.400 kb on + strand, within ABZR87_RS04155 at 871.400 kb on + strand, within ABZR87_RS04155 at 871.400 kb on + strand, within ABZR87_RS04155 at 871.401 kb on - strand, within ABZR87_RS04155 at 871.401 kb on - strand, within ABZR87_RS04155 at 871.401 kb on - strand, within ABZR87_RS04155 at 871.401 kb on - strand, within ABZR87_RS04155 at 871.436 kb on + strand, within ABZR87_RS04155 at 871.436 kb on + strand, within ABZR87_RS04155 at 871.436 kb on + strand, within ABZR87_RS04155 at 871.437 kb on - strand, within ABZR87_RS04155 at 871.437 kb on - strand, within ABZR87_RS04155 at 871.437 kb on - strand, within ABZR87_RS04155 at 871.590 kb on + strand at 871.590 kb on + strand at 871.590 kb on + strand at 871.590 kb on + strand at 871.590 kb on + strand at 871.590 kb on + strand at 871.590 kb on + strand at 871.590 kb on + strand at 871.590 kb on + strand at 871.591 kb on - strand at 871.591 kb on - strand at 871.591 kb on - strand at 871.885 kb on - strand, within ABZR87_RS04160 at 871.948 kb on - strand, within ABZR87_RS04160 at 871.948 kb on - strand, within ABZR87_RS04160 at 871.948 kb on - strand, within ABZR87_RS04160 at 872.107 kb on - strand, within ABZR87_RS04160 at 872.160 kb on + strand, within ABZR87_RS04160 at 872.439 kb on + strand at 872.440 kb on - strand at 872.440 kb on - strand at 872.470 kb on + strand at 872.481 kb on - strand at 872.617 kb on - strand at 872.924 kb on + strand, within ABZR87_RS04165 at 872.924 kb on + strand, within ABZR87_RS04165 at 872.924 kb on + strand, within ABZR87_RS04165 at 872.925 kb on - strand, within ABZR87_RS04165 at 872.925 kb on - strand, within ABZR87_RS04165 at 872.925 kb on - strand, within ABZR87_RS04165 at 872.925 kb on - strand, within ABZR87_RS04165 at 872.925 kb on - strand, within ABZR87_RS04165 at 872.925 kb on - strand, within ABZR87_RS04165 at 873.191 kb on + strand, within ABZR87_RS04165 at 873.191 kb on + strand, within ABZR87_RS04165 at 873.192 kb on - strand, within ABZR87_RS04165 at 873.192 kb on - strand, within ABZR87_RS04165 at 873.192 kb on - strand, within ABZR87_RS04165 at 873.192 kb on - strand, within ABZR87_RS04165 at 873.263 kb on + strand, within ABZR87_RS04165 at 873.264 kb on - strand, within ABZR87_RS04165 at 873.422 kb on + strand, within ABZR87_RS04165 at 873.422 kb on + strand, within ABZR87_RS04165 at 873.423 kb on - strand, within ABZR87_RS04165 at 873.423 kb on - strand, within ABZR87_RS04165
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 870,627 + ABZR87_RS04150 0.21 +0.8 870,627 + ABZR87_RS04150 0.21 +0.9 870,627 + ABZR87_RS04150 0.21 +0.1 870,628 - ABZR87_RS04150 0.22 +0.4 870,628 - ABZR87_RS04150 0.22 -1.3 870,628 - ABZR87_RS04150 0.22 -0.1 870,628 - ABZR87_RS04150 0.22 +0.2 870,912 + ABZR87_RS04150 0.53 +0.2 870,912 + ABZR87_RS04150 0.53 +0.5 870,942 + ABZR87_RS04150 0.56 -0.3 870,942 + ABZR87_RS04150 0.56 +0.0 870,942 + ABZR87_RS04150 0.56 +0.2 870,943 - ABZR87_RS04150 0.56 -0.1 870,943 - ABZR87_RS04150 0.56 +0.1 870,943 - ABZR87_RS04150 0.56 -0.4 870,954 + ABZR87_RS04150 0.57 -0.6 871,209 + ABZR87_RS04150 0.85 -0.1 871,209 + ABZR87_RS04150 0.85 -0.8 871,209 + ABZR87_RS04150 0.85 +0.3 871,209 + ABZR87_RS04150 0.85 -0.5 871,209 + ABZR87_RS04150 0.85 +0.2 871,209 + ABZR87_RS04150 0.85 -0.2 871,209 + ABZR87_RS04150 0.85 -0.1 871,209 + ABZR87_RS04150 0.85 -0.1 871,209 + ABZR87_RS04150 0.85 +0.4 871,210 - ABZR87_RS04150 0.86 -0.3 871,242 + ABZR87_RS04150 0.89 -0.6 871,243 - ABZR87_RS04150 0.89 -0.3 871,338 + -0.7 871,338 + -0.4 871,339 - -0.5 871,339 - +0.4 871,400 + ABZR87_RS04155 0.25 -0.7 871,400 + ABZR87_RS04155 0.25 -1.0 871,400 + ABZR87_RS04155 0.25 -0.4 871,400 + ABZR87_RS04155 0.25 +0.2 871,400 + ABZR87_RS04155 0.25 -0.2 871,401 - ABZR87_RS04155 0.25 +0.5 871,401 - ABZR87_RS04155 0.25 -0.9 871,401 - ABZR87_RS04155 0.25 +0.3 871,401 - ABZR87_RS04155 0.25 +0.2 871,436 + ABZR87_RS04155 0.42 -0.0 871,436 + ABZR87_RS04155 0.42 -0.8 871,436 + ABZR87_RS04155 0.42 -0.3 871,437 - ABZR87_RS04155 0.42 -0.2 871,437 - ABZR87_RS04155 0.42 +0.9 871,437 - ABZR87_RS04155 0.42 +0.7 871,590 + +0.0 871,590 + -0.4 871,590 + +0.5 871,590 + -0.3 871,590 + -0.4 871,590 + -0.7 871,590 + -0.8 871,590 + +0.5 871,590 + -0.4 871,591 - -0.8 871,591 - -0.5 871,591 - +0.7 871,885 - ABZR87_RS04160 0.35 -1.5 871,948 - ABZR87_RS04160 0.42 -0.4 871,948 - ABZR87_RS04160 0.42 +0.2 871,948 - ABZR87_RS04160 0.42 -1.5 872,107 - ABZR87_RS04160 0.59 +0.1 872,160 + ABZR87_RS04160 0.65 -0.8 872,439 + -0.1 872,440 - +0.0 872,440 - +0.1 872,470 + -0.5 872,481 - -0.3 872,617 - +0.4 872,924 + ABZR87_RS04165 0.36 -1.0 872,924 + ABZR87_RS04165 0.36 -0.6 872,924 + ABZR87_RS04165 0.36 -0.2 872,925 - ABZR87_RS04165 0.36 +0.6 872,925 - ABZR87_RS04165 0.36 +0.6 872,925 - ABZR87_RS04165 0.36 +0.0 872,925 - ABZR87_RS04165 0.36 +0.4 872,925 - ABZR87_RS04165 0.36 +0.7 872,925 - ABZR87_RS04165 0.36 +0.6 873,191 + ABZR87_RS04165 0.63 +0.8 873,191 + ABZR87_RS04165 0.63 +0.5 873,192 - ABZR87_RS04165 0.64 -0.6 873,192 - ABZR87_RS04165 0.64 -0.1 873,192 - ABZR87_RS04165 0.64 -0.4 873,192 - ABZR87_RS04165 0.64 -0.0 873,263 + ABZR87_RS04165 0.71 -0.4 873,264 - ABZR87_RS04165 0.71 +0.4 873,422 + ABZR87_RS04165 0.87 +0.0 873,422 + ABZR87_RS04165 0.87 +0.0 873,423 - ABZR87_RS04165 0.87 +0.3 873,423 - ABZR87_RS04165 0.87 -0.7
Or see this region's nucleotide sequence