Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01665 and ABZR87_RS01670 are separated by 120 nucleotides ABZR87_RS01670 and ABZR87_RS01675 are separated by 92 nucleotides
ABZR87_RS01665: ABZR87_RS01665 - DUF3426 domain-containing protein, at 348,799 to 350,250
_RS01665
ABZR87_RS01670: ABZR87_RS01670 - thiol peroxidase, at 350,371 to 350,871
_RS01670
ABZR87_RS01675: ABZR87_RS01675 - carbohydrate kinase family protein, at 350,964 to 351,899
_RS01675
Position (kb) 350
351 Strain fitness (log2 ratio) -2
-1
0
1
2 at 349.400 kb on + strand, within ABZR87_RS01665 at 349.517 kb on + strand, within ABZR87_RS01665 at 349.517 kb on + strand, within ABZR87_RS01665 at 349.518 kb on - strand, within ABZR87_RS01665 at 349.569 kb on + strand, within ABZR87_RS01665 at 349.569 kb on + strand, within ABZR87_RS01665 at 349.999 kb on + strand, within ABZR87_RS01665 at 350.000 kb on - strand, within ABZR87_RS01665 at 350.000 kb on - strand, within ABZR87_RS01665 at 350.000 kb on - strand, within ABZR87_RS01665 at 350.000 kb on - strand, within ABZR87_RS01665 at 350.000 kb on - strand, within ABZR87_RS01665 at 350.000 kb on - strand, within ABZR87_RS01665 at 350.122 kb on + strand at 350.123 kb on - strand at 350.123 kb on - strand at 350.123 kb on - strand at 350.123 kb on - strand at 350.146 kb on + strand at 350.146 kb on + strand at 350.146 kb on + strand at 350.146 kb on + strand at 350.146 kb on + strand at 350.147 kb on - strand at 350.147 kb on - strand at 350.147 kb on - strand at 350.147 kb on - strand at 350.180 kb on + strand at 350.181 kb on - strand at 350.266 kb on + strand at 350.267 kb on - strand at 350.364 kb on + strand at 350.364 kb on + strand at 350.365 kb on - strand at 350.365 kb on - strand at 350.595 kb on + strand, within ABZR87_RS01670 at 350.719 kb on + strand, within ABZR87_RS01670 at 350.803 kb on + strand, within ABZR87_RS01670 at 350.803 kb on + strand, within ABZR87_RS01670 at 350.804 kb on - strand, within ABZR87_RS01670 at 350.842 kb on + strand at 350.842 kb on + strand at 350.842 kb on + strand at 350.842 kb on + strand at 350.842 kb on + strand at 350.842 kb on + strand at 350.843 kb on - strand at 350.843 kb on - strand at 350.843 kb on - strand at 350.843 kb on - strand at 350.869 kb on + strand at 350.869 kb on + strand at 350.869 kb on + strand at 350.870 kb on - strand at 350.870 kb on - strand at 350.870 kb on - strand at 350.870 kb on - strand at 350.947 kb on - strand at 350.947 kb on - strand at 350.947 kb on - strand at 350.947 kb on - strand at 350.963 kb on + strand at 350.963 kb on + strand at 350.995 kb on - strand at 351.127 kb on - strand, within ABZR87_RS01675 at 351.192 kb on + strand, within ABZR87_RS01675 at 351.233 kb on + strand, within ABZR87_RS01675 at 351.234 kb on - strand, within ABZR87_RS01675 at 351.522 kb on + strand, within ABZR87_RS01675 at 351.663 kb on + strand, within ABZR87_RS01675 at 351.664 kb on - strand, within ABZR87_RS01675 at 351.741 kb on + strand, within ABZR87_RS01675 at 351.741 kb on + strand, within ABZR87_RS01675
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 349,400 + ABZR87_RS01665 0.41 -0.2 349,517 + ABZR87_RS01665 0.49 +0.3 349,517 + ABZR87_RS01665 0.49 -1.6 349,518 - ABZR87_RS01665 0.50 +0.5 349,569 + ABZR87_RS01665 0.53 -0.7 349,569 + ABZR87_RS01665 0.53 -0.6 349,999 + ABZR87_RS01665 0.83 +0.3 350,000 - ABZR87_RS01665 0.83 +0.4 350,000 - ABZR87_RS01665 0.83 +0.7 350,000 - ABZR87_RS01665 0.83 -1.2 350,000 - ABZR87_RS01665 0.83 -0.1 350,000 - ABZR87_RS01665 0.83 -0.8 350,000 - ABZR87_RS01665 0.83 +0.4 350,122 + -0.2 350,123 - +0.4 350,123 - -0.0 350,123 - +0.6 350,123 - +0.0 350,146 + +0.3 350,146 + +0.8 350,146 + -0.8 350,146 + +0.3 350,146 + -1.0 350,147 - +1.3 350,147 - -0.2 350,147 - +1.7 350,147 - -1.9 350,180 + -0.3 350,181 - -0.7 350,266 + +0.4 350,267 - +0.4 350,364 + -0.0 350,364 + +0.3 350,365 - +0.5 350,365 - -0.5 350,595 + ABZR87_RS01670 0.45 -0.8 350,719 + ABZR87_RS01670 0.69 -1.4 350,803 + ABZR87_RS01670 0.86 +0.2 350,803 + ABZR87_RS01670 0.86 -1.0 350,804 - ABZR87_RS01670 0.86 -0.2 350,842 + +0.2 350,842 + -1.3 350,842 + +0.1 350,842 + -0.1 350,842 + +0.5 350,842 + +0.3 350,843 - -0.0 350,843 - +0.4 350,843 - +0.4 350,843 - +0.3 350,869 + -0.4 350,869 + -1.0 350,869 + -0.3 350,870 - -0.4 350,870 - +0.5 350,870 - -0.1 350,870 - -0.5 350,947 - -0.6 350,947 - +0.6 350,947 - +2.0 350,947 - +0.1 350,963 + -0.4 350,963 + +0.5 350,995 - -0.3 351,127 - ABZR87_RS01675 0.17 +1.6 351,192 + ABZR87_RS01675 0.24 -0.2 351,233 + ABZR87_RS01675 0.29 -0.4 351,234 - ABZR87_RS01675 0.29 +0.6 351,522 + ABZR87_RS01675 0.60 +0.6 351,663 + ABZR87_RS01675 0.75 -1.6 351,664 - ABZR87_RS01675 0.75 -0.1 351,741 + ABZR87_RS01675 0.83 +0.6 351,741 + ABZR87_RS01675 0.83 +0.1
Or see this region's nucleotide sequence