Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01470 and ABZR87_RS01475 are separated by 17 nucleotides ABZR87_RS01475 and ABZR87_RS01480 are separated by 33 nucleotides
ABZR87_RS01470: ABZR87_RS01470 - L-arabinose ABC transporter permease AraH, at 308,791 to 309,798
_RS01470
ABZR87_RS01475: ABZR87_RS01475 - L-arabinose ABC transporter ATP-binding protein AraG, at 309,816 to 311,336
_RS01475
ABZR87_RS01480: ABZR87_RS01480 - arabinose ABC transporter substrate-binding protein, at 311,370 to 312,317
_RS01480
Position (kb) 309
310
311
312 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 308.870 kb on + strand at 308.870 kb on + strand at 308.870 kb on + strand at 308.870 kb on + strand at 308.871 kb on - strand at 308.871 kb on - strand at 308.871 kb on - strand at 309.177 kb on + strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.188 kb on + strand, within ABZR87_RS01470 at 309.644 kb on + strand, within ABZR87_RS01470 at 309.645 kb on - strand, within ABZR87_RS01470 at 310.015 kb on + strand, within ABZR87_RS01475 at 310.015 kb on + strand, within ABZR87_RS01475 at 310.016 kb on - strand, within ABZR87_RS01475 at 310.027 kb on + strand, within ABZR87_RS01475 at 310.027 kb on + strand, within ABZR87_RS01475 at 310.027 kb on + strand, within ABZR87_RS01475 at 310.027 kb on + strand, within ABZR87_RS01475 at 310.028 kb on - strand, within ABZR87_RS01475 at 310.028 kb on - strand, within ABZR87_RS01475 at 310.028 kb on - strand, within ABZR87_RS01475 at 310.028 kb on - strand, within ABZR87_RS01475 at 310.028 kb on - strand, within ABZR87_RS01475 at 310.074 kb on + strand, within ABZR87_RS01475 at 310.074 kb on + strand, within ABZR87_RS01475 at 310.201 kb on + strand, within ABZR87_RS01475 at 310.201 kb on + strand, within ABZR87_RS01475 at 310.201 kb on + strand, within ABZR87_RS01475 at 310.201 kb on + strand, within ABZR87_RS01475 at 310.509 kb on + strand, within ABZR87_RS01475 at 310.753 kb on + strand, within ABZR87_RS01475 at 310.753 kb on + strand, within ABZR87_RS01475 at 310.753 kb on + strand, within ABZR87_RS01475 at 310.754 kb on - strand, within ABZR87_RS01475 at 311.176 kb on + strand, within ABZR87_RS01475 at 311.195 kb on + strand at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.477 kb on - strand, within ABZR87_RS01480 at 311.477 kb on - strand, within ABZR87_RS01480 at 311.556 kb on - strand, within ABZR87_RS01480 at 311.857 kb on + strand, within ABZR87_RS01480 at 311.857 kb on + strand, within ABZR87_RS01480 at 311.858 kb on - strand, within ABZR87_RS01480
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 308,870 + -2.5 308,870 + -0.8 308,870 + -3.4 308,870 + -1.7 308,871 - -0.6 308,871 - -3.2 308,871 - -3.4 309,177 + ABZR87_RS01470 0.38 -2.9 309,178 - ABZR87_RS01470 0.38 -3.1 309,178 - ABZR87_RS01470 0.38 -2.5 309,178 - ABZR87_RS01470 0.38 -3.6 309,178 - ABZR87_RS01470 0.38 -2.5 309,188 + ABZR87_RS01470 0.39 -4.6 309,644 + ABZR87_RS01470 0.85 -3.2 309,645 - ABZR87_RS01470 0.85 -1.5 310,015 + ABZR87_RS01475 0.13 -3.6 310,015 + ABZR87_RS01475 0.13 -1.5 310,016 - ABZR87_RS01475 0.13 -2.4 310,027 + ABZR87_RS01475 0.14 -3.5 310,027 + ABZR87_RS01475 0.14 -3.3 310,027 + ABZR87_RS01475 0.14 -5.3 310,027 + ABZR87_RS01475 0.14 -1.5 310,028 - ABZR87_RS01475 0.14 -2.5 310,028 - ABZR87_RS01475 0.14 -2.6 310,028 - ABZR87_RS01475 0.14 -1.3 310,028 - ABZR87_RS01475 0.14 -3.1 310,028 - ABZR87_RS01475 0.14 -2.5 310,074 + ABZR87_RS01475 0.17 +0.2 310,074 + ABZR87_RS01475 0.17 -3.0 310,201 + ABZR87_RS01475 0.25 -1.7 310,201 + ABZR87_RS01475 0.25 -4.3 310,201 + ABZR87_RS01475 0.25 -4.2 310,201 + ABZR87_RS01475 0.25 -3.4 310,509 + ABZR87_RS01475 0.46 -0.8 310,753 + ABZR87_RS01475 0.62 -4.9 310,753 + ABZR87_RS01475 0.62 -1.7 310,753 + ABZR87_RS01475 0.62 -2.9 310,754 - ABZR87_RS01475 0.62 -4.2 311,176 + ABZR87_RS01475 0.89 -3.5 311,195 + -2.8 311,476 + ABZR87_RS01480 0.11 -1.9 311,476 + ABZR87_RS01480 0.11 -3.5 311,476 + ABZR87_RS01480 0.11 -1.0 311,476 + ABZR87_RS01480 0.11 -2.5 311,476 + ABZR87_RS01480 0.11 -4.3 311,476 + ABZR87_RS01480 0.11 +0.2 311,476 + ABZR87_RS01480 0.11 -2.5 311,477 - ABZR87_RS01480 0.11 -2.3 311,477 - ABZR87_RS01480 0.11 -0.7 311,556 - ABZR87_RS01480 0.20 -3.0 311,857 + ABZR87_RS01480 0.51 -4.2 311,857 + ABZR87_RS01480 0.51 -2.8 311,858 - ABZR87_RS01480 0.51 -5.0
Or see this region's nucleotide sequence